Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51841 | Canola | extracellular, plasma membrane, vacuole | 93.36 | 93.36 |
| CDY45080 | Canola | extracellular, plasma membrane, vacuole | 92.89 | 92.89 |
| Bra006567.1-P | Field mustard | extracellular, plasma membrane, vacuole | 92.89 | 92.89 |
| Bra020113.1-P | Field mustard | extracellular, plasma membrane, vacuole | 92.89 | 92.89 |
| CDY22866 | Canola | extracellular | 92.42 | 92.42 |
| CDY16549 | Canola | extracellular | 92.42 | 92.42 |
| CDX92448 | Canola | extracellular | 92.42 | 92.42 |
| CDX85429 | Canola | extracellular | 92.42 | 92.42 |
| Bra002316.1-P | Field mustard | extracellular | 92.42 | 92.42 |
| CDX70935 | Canola | extracellular, vacuole | 91.47 | 91.47 |
| CDY45077 | Canola | extracellular | 75.36 | 75.0 |
| CDY27880 | Canola | extracellular | 75.36 | 75.0 |
| Bra020115.1-P | Field mustard | extracellular | 75.36 | 75.0 |
| CDY45079 | Canola | extracellular, vacuole | 76.3 | 73.52 |
| Bra020114.1-P | Field mustard | extracellular, vacuole | 76.3 | 73.52 |
| KRH02617 | Soybean | nucleus | 69.19 | 70.19 |
| KRH12528 | Soybean | extracellular | 68.25 | 67.61 |
| VIT_18s0086g00590.t01 | Wine grape | cytosol | 38.86 | 66.67 |
| PGSC0003DMT400036428 | Potato | extracellular | 64.45 | 65.38 |
| PGSC0003DMT400030317 | Potato | extracellular | 63.98 | 64.9 |
| Solyc03g123410.1.1 | Tomato | nucleus | 63.98 | 64.9 |
| AT1G72610.1 | Thale cress | extracellular, vacuole | 63.03 | 63.94 |
| VIT_09s0002g01330.t01 | Wine grape | cytosol, extracellular, nucleus | 28.44 | 60.61 |
| TraesCS2B01G090300.1 | Wheat | extracellular | 60.19 | 59.91 |
| TraesCS2D01G073700.1 | Wheat | extracellular | 60.19 | 59.91 |
| TraesCS7D01G180200.1 | Wheat | extracellular, vacuole | 59.72 | 59.43 |
| TraesCS2A01G075000.1 | Wheat | extracellular | 59.72 | 59.15 |
| TraesCS7A01G178300.1 | Wheat | extracellular | 59.24 | 58.96 |
| TraesCS7B01G084000.1 | Wheat | plastid | 59.24 | 58.96 |
| HORVU7Hr1G036720.1 | Barley | extracellular | 58.77 | 58.49 |
| Os08t0460000-01 | Rice | extracellular | 58.77 | 58.22 |
| VIT_09s0002g01320.t01 | Wine grape | extracellular | 57.35 | 57.89 |
| TraesCS2D01G073600.1 | Wheat | extracellular | 56.87 | 57.69 |
| VIT_18s0086g00410.t01 | Wine grape | extracellular | 56.87 | 57.42 |
| KRH19305 | Soybean | cytosol, extracellular, plastid | 58.29 | 56.68 |
| Zm00001d037513_P001 | Maize | plastid | 56.87 | 56.6 |
| EES17780 | Sorghum | extracellular, vacuole | 56.87 | 54.3 |
| VIT_07s0005g05920.t01 | Wine grape | extracellular | 53.55 | 54.07 |
| VIT_12s0059g00740.t01 | Wine grape | cytosol | 30.81 | 52.85 |
| VIT_07s0005g05910.t01 | Wine grape | extracellular | 52.13 | 52.63 |
| VIT_07s0005g05930.t01 | Wine grape | extracellular | 52.13 | 52.63 |
| GSMUA_Achr9P16110_001 | Banana | plasma membrane, plastid, vacuole | 63.51 | 52.34 |
| GSMUA_Achr2P18710_001 | Banana | extracellular | 60.66 | 51.2 |
| VIT_09s0002g01340.t01 | Wine grape | extracellular, vacuole | 51.66 | 43.95 |
| AT1G02335.1 | Thale cress | extracellular, vacuole | 40.76 | 39.27 |
| AT3G05930.1 | Thale cress | extracellular | 39.34 | 37.9 |
| AT3G62020.1 | Thale cress | extracellular, vacuole | 39.34 | 37.73 |
| AT1G09560.1 | Thale cress | extracellular | 37.91 | 36.53 |
| AT1G18980.1 | Thale cress | extracellular | 37.91 | 36.36 |
| AT5G26700.1 | Thale cress | extracellular, vacuole | 36.02 | 35.68 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 36.49 | 35.0 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 31.75 | 30.88 |
| AT1G74820.1 | Thale cress | extracellular | 32.23 | 29.96 |
| AT3G10080.2 | Thale cress | mitochondrion | 34.12 | 24.16 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:832185 | ProteinID:AED92868.1 | EMBL:AF296832 | ArrayExpress:AT5G20630 |
| EnsemblPlantsGene:AT5G20630 | RefSeq:AT5G20630 | TAIR:AT5G20630 | RefSeq:AT5G20630-TAIR-G | EnsemblPlants:AT5G20630.1 | TAIR:AT5G20630.1 |
| EMBL:AY039516 | EMBL:AY055786 | ProteinID:BAA77208.1 | ProteinID:CAB54516.1 | InterPro:Cupin_1 | Symbol:GLP3 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009409 | GO:GO:0009505 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0031012 |
| GO:GO:0045735 | GO:GO:0046872 | GO:GO:0048046 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 |
| RefSeq:NP_197563.1 | UniProt:P94072 | PFAM:PF00190 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005417 | PO:PO:0006339 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00325 | ScanProsite:PS00725 |
| PANTHER:PTHR31238 | PANTHER:PTHR31238:SF92 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 |
| SignalP:SignalP-noTM | EMBL:U75188 | EMBL:U75193 | EMBL:U75195 | EMBL:U75203 | EMBL:U75205 |
| UniParc:UPI0000000B8C | EMBL:Y12673 | SEG:seg | : | : | : |
Description
GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
Coordinates
chr5:-:6975029..6976036
Molecular Weight (calculated)
21837.4 Da
IEP (calculated)
6.769
GRAVY (calculated)
0.404
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.