Factsheet for AT5G26700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
vacuole 5
plasma membrane 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009907.1-P	Field mustard	cytosol	72.77	84.24
Bra036586.1-P	Field mustard	extracellular	84.98	83.41
CDY61117	Canola	extracellular	84.98	83.03
CDY19762	Canola	extracellular	84.51	82.95
CDX87040	Canola	extracellular	84.51	82.95
CDY05519	Canola	extracellular	84.51	82.57
CDX80572	Canola	extracellular	84.51	82.57
Bra020528.1-P	Field mustard	extracellular	83.57	81.65
CDY05327	Canola	vacuole	70.42	77.32
AT3G05930.1	Thale cress	extracellular	65.26	63.47
AT1G09560.1	Thale cress	extracellular	60.09	58.45
AT3G62020.1	Thale cress	extracellular, vacuole	55.87	54.09
AT1G02335.1	Thale cress	extracellular, vacuole	54.93	53.42
AT1G18980.1	Thale cress	extracellular	41.31	40.0
AT1G18970.1	Thale cress	extracellular, vacuole	39.44	38.18
AT1G72610.1	Thale cress	extracellular, vacuole	35.68	36.54
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	35.68	36.02
AT1G10460.1	Thale cress	extracellular, vacuole	34.74	34.1
AT1G74820.1	Thale cress	extracellular	32.86	30.84
AT3G10080.2	Thale cress	mitochondrion	35.68	25.5

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:832719	ProteinID:AAC13591.1	ProteinID:AED93574.1	EMBL:AK118551
ArrayExpress:AT5G26700	EnsemblPlantsGene:AT5G26700	RefSeq:AT5G26700	TAIR:AT5G26700	RefSeq:AT5G26700-TAIR-G	EnsemblPlants:AT5G26700.1
TAIR:AT5G26700.1	Unigene:At.71213	EMBL:BT005231	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275
GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312
GO:GO:0045735	GO:GO:0046872	GO:GO:0048046	GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS
InterPro:IPR014710	RefSeq:NP_850875.1	UniProt:O65252	PFAM:PF00190	PO:PO:0000293	PO:PO:0001185
PO:PO:0007611	PO:PO:0007616	PO:PO:0009009	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0025022	PO:PO:0025281
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	UniProt:Q541W3	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0000004203	:

Description

Probable germin-like protein subfamily 2 member 5 [Source:UniProtKB/Swiss-Prot;Acc:O65252]

Coordinates

chr5:-:9308290..9309625

Molecular Weight (calculated)

22812.8 Da

IEP (calculated)

9.790

GRAVY (calculated)

0.186

Length

213 amino acids

Sequence
(BLAST)

001: MASFATHLVV VVTMLFVAMA SAEMLQDVCV ADLSNAVKVN GYTCKDSTQI TPEDFYFKGL ANIAATNTST GSVVTGANVE KLPGLNTLGL SMSRIDYAPN
101: GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
201: QVKKIKLRYA PKK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.