CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020528.1-P	Field mustard	extracellular	96.79	96.79
CDY61117	Canola	extracellular	92.2	92.2
CDY05327	Canola	vacuole	80.28	90.21
CDX80572	Canola	extracellular	89.45	89.45
CDY19762	Canola	extracellular	88.53	88.94
CDX87040	Canola	extracellular	88.07	88.48
AT5G26700.1	Thale cress	extracellular, vacuole	82.57	84.51
CDY05213	Canola	extracellular	62.84	62.84
CDY18833	Canola	extracellular	61.93	61.93
CDX74123	Canola	extracellular	60.55	60.55
CDY49987	Canola	extracellular	60.09	60.09
CDY06361	Canola	extracellular	57.8	58.33
CDY22633	Canola	extracellular	56.88	57.41
CDY47579	Canola	extracellular	50.0	57.37
CDY50897	Canola	extracellular	56.42	55.66
CDY31080	Canola	extracellular	55.5	55.25
CDX93502	Canola	extracellular	56.42	55.16
CDY20692	Canola	extracellular	55.5	55.0
CDX76609	Canola	extracellular	54.59	54.09
CDX89983	Canola	extracellular, vacuole	53.21	53.21
CDY11392	Canola	extracellular	53.67	53.18
CDY15231	Canola	extracellular, vacuole	52.75	52.75
CDX81907	Canola	extracellular	40.83	41.59
CDY26706	Canola	extracellular	40.83	41.59
CDY21688	Canola	extracellular	40.83	41.59
CDY19265	Canola	extracellular	40.37	41.12
CDY51841	Canola	extracellular, plasma membrane, vacuole	37.61	38.86
CDY45080	Canola	extracellular, plasma membrane, vacuole	37.61	38.86
CDX68260	Canola	extracellular, vacuole	36.24	38.16
CDX92448	Canola	extracellular	36.7	37.91
CDX70935	Canola	extracellular, vacuole	36.7	37.91
CDX85429	Canola	extracellular	36.7	37.91
CDY22866	Canola	extracellular	36.7	37.91
CDY16549	Canola	extracellular	36.7	37.91
CDY27880	Canola	extracellular	36.24	37.26
CDY45077	Canola	extracellular	36.24	37.26
CDY11164	Canola	extracellular, vacuole	35.32	37.2
CDY45079	Canola	extracellular, vacuole	36.24	36.07
CDY41321	Canola	extracellular	36.24	34.96
CDY22215	Canola	extracellular	36.24	34.96
CDX96421	Canola	vacuole	33.95	34.1
CDX68163	Canola	extracellular	33.95	33.79
CDX72929	Canola	vacuole	33.49	33.64
CDY34891	Canola	vacuole	28.9	33.16
CDY07800	Canola	vacuole	27.98	31.94
CDX85858	Canola	extracellular	31.65	30.13
CDX82141	Canola	vacuole	24.31	23.98

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	GO:A0A078EY81	EnsemblPlants:CDY05519	ProteinID:CDY05519	ProteinID:CDY05519.1
InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145
GO:GO:0045735	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00120460001	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710
PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEDE83

Description

BnaA02g31720D

Coordinates

chrLK031962:+:642877..643716

Molecular Weight (calculated)

23239.3 Da

IEP (calculated)

9.738

GRAVY (calculated)

0.153

Length

218 amino acids

Sequence
(BLAST)

001: MASVATHIVV VVTMLVSAMA VASESNMLQD ICVADLSNAV KVNGYTCKDT TQVTPEDFYF QGLASPSAAS NTSTGAIVTG ATVEKLPGLN TLGLSMSRID
101: YAPNGLNPPH IHPRASEIIY VLEGQLYVGF VTTAGKLVAK HVNKGEVFVF PKGLLHFQKN IAKSAPASVI AAFDSQLPGT QSLVSSLFGA LPEDILVKSF
201: QFKPKQVKKI KSRYQPKK

Best Arabidopsis Sequence Match ( AT5G26700.1 )
(BLAST)

001: MASFATHLVV VVTMLFVAMA SAEMLQDVCV ADLSNAVKVN GYTCKDSTQI TPEDFYFKGL ANIAATNTST GSVVTGANVE KLPGLNTLGL SMSRIDYAPN
101: GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
201: QVKKIKLRYA PKK

Arabidopsis Description

Probable germin-like protein subfamily 2 member 5 [Source:UniProtKB/Swiss-Prot;Acc:O65252]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.