CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001173.1-P	Field mustard	extracellular, vacuole	99.08	99.08
CDY49987	Canola	extracellular	97.71	97.71
CDY05213	Canola	extracellular	86.24	86.24
CDY18833	Canola	extracellular	84.86	84.86
CDY47579	Canola	extracellular	69.27	79.47
AT3G05930.1	Thale cress	extracellular	79.36	79.0
CDY61117	Canola	extracellular	60.55	60.55
CDY05519	Canola	extracellular	60.55	60.55
CDX80572	Canola	extracellular	60.55	60.55
CDX87040	Canola	extracellular	58.72	58.99
CDY19762	Canola	extracellular	58.26	58.53
CDY05327	Canola	vacuole	50.92	57.22
CDX76609	Canola	extracellular	54.59	54.09
CDY11392	Canola	extracellular	54.13	53.64
CDY06361	Canola	extracellular	52.75	53.24
CDY50897	Canola	extracellular	53.21	52.49
CDY22633	Canola	extracellular	51.83	52.31
CDX89983	Canola	extracellular, vacuole	51.83	51.83
CDY31080	Canola	extracellular	51.83	51.6
CDX93502	Canola	extracellular	52.75	51.57
CDY15231	Canola	extracellular, vacuole	51.38	51.38
CDY20692	Canola	extracellular	51.83	51.36
CDY19265	Canola	extracellular	42.2	42.99
CDY26706	Canola	extracellular	41.74	42.52
CDY21688	Canola	extracellular	40.37	41.12
CDX81907	Canola	extracellular	40.37	41.12
CDX68163	Canola	extracellular	37.16	36.99
CDX85858	Canola	extracellular	36.7	34.93
CDY27880	Canola	extracellular	33.95	34.91
CDY45077	Canola	extracellular	33.95	34.91
CDY51841	Canola	extracellular, plasma membrane, vacuole	33.49	34.6
CDY45080	Canola	extracellular, plasma membrane, vacuole	33.49	34.6
CDY11164	Canola	extracellular, vacuole	32.11	33.82
CDY16549	Canola	extracellular	32.57	33.65
CDX85429	Canola	extracellular	32.57	33.65
CDY22866	Canola	extracellular	32.57	33.65
CDX92448	Canola	extracellular	32.57	33.65
CDX70935	Canola	extracellular, vacuole	32.57	33.65
CDX68260	Canola	extracellular, vacuole	31.65	33.33
CDY45079	Canola	extracellular, vacuole	33.03	32.88
CDX72929	Canola	vacuole	32.57	32.72
CDX96421	Canola	vacuole	32.11	32.26
CDY34891	Canola	vacuole	27.98	32.11
CDY41321	Canola	extracellular	33.03	31.86
CDY22215	Canola	extracellular	33.03	31.86
CDY07800	Canola	vacuole	27.06	30.89
CDX82141	Canola	vacuole	23.39	23.08

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	GO:A0A078CGN6	EnsemblPlants:CDX74123	ProteinID:CDX74123	ProteinID:CDX74123.1
InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145	GO:GO:0045735	EnsemblPlantsGene:GSBRNA2T00111879001
InterPro:Germin	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325	PANTHER:PTHR31238	PANTHER:PTHR31238:SF18
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0004EEE390

Description

BnaA03g29240D

Coordinates

chrLK031800:-:1426835..1428032

Molecular Weight (calculated)

23166.0 Da

IEP (calculated)

8.696

GRAVY (calculated)

0.028

Length

218 amino acids

Sequence
(BLAST)

001: MKTSMTHLFV TVLLVAAHTA FAETNMLQDL CVADLKGAKV NGYACKDPSQ ITPEDFYYIG LAAPADTSNT AMGSAITAGN VEKIPGLNMM GTSMSRIDYA
101: PGGLNPPHLH PRASEAIFVL EGRLFVGFLT TTGKLISKHI NKGDVFVFPR ALLHFQQNPN NAPASVIAAF DSQNPGTQSV GPSLFGANPP IPDDLLAKAF
201: GVEPQVIQKV KGKFPAKK

Best Arabidopsis Sequence Match ( AT3G05930.1 )
(BLAST)

001: MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK

Arabidopsis Description

GLP8Germin-like protein subfamily 2 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P93000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.