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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031430.1-P Field mustard extracellular 97.37 98.4
CDY18833 Canola extracellular 90.0 78.44
CDY49987 Canola extracellular 80.0 69.72
CDX74123 Canola extracellular 79.47 69.27
AT3G05930.1 Thale cress extracellular 77.89 67.58
CDY05213 Canola extracellular 77.37 67.43
CDY61117 Canola extracellular 57.37 50.0
CDY05519 Canola extracellular 57.37 50.0
CDX80572 Canola extracellular 57.37 50.0
CDX87040 Canola extracellular 56.84 49.77
CDY19762 Canola extracellular 56.84 49.77
CDY06361 Canola extracellular 53.16 46.76
CDY05327 Canola vacuole 46.84 45.88
CDY22633 Canola extracellular 52.11 45.83
CDX93502 Canola extracellular 53.68 45.74
CDY50897 Canola extracellular 53.16 45.7
CDY11392 Canola extracellular 52.63 45.45
CDX76609 Canola extracellular 52.63 45.45
CDY31080 Canola extracellular 51.58 44.75
CDY20692 Canola extracellular 51.58 44.55
CDY15231 Canola extracellular, vacuole 47.37 41.28
CDX89983 Canola extracellular, vacuole 47.37 41.28
CDY19265 Canola extracellular 42.11 37.38
CDY21688 Canola extracellular 41.05 36.45
CDY26706 Canola extracellular 41.05 36.45
CDX81907 Canola extracellular 41.05 36.45
CDX68163 Canola extracellular 38.42 33.33
CDY34891 Canola vacuole 32.11 32.11
CDY45077 Canola extracellular 35.79 32.08
CDY27880 Canola extracellular 35.79 32.08
CDY07800 Canola vacuole 32.11 31.94
CDY51841 Canola extracellular, plasma membrane, vacuole 35.26 31.75
CDY45080 Canola extracellular, plasma membrane, vacuole 35.26 31.75
CDX85858 Canola extracellular 37.37 31.0
CDY16549 Canola extracellular 34.21 30.81
CDX85429 Canola extracellular 34.21 30.81
CDX92448 Canola extracellular 34.21 30.81
CDY22866 Canola extracellular 34.21 30.81
CDX70935 Canola extracellular, vacuole 34.21 30.81
CDY11164 Canola extracellular, vacuole 31.58 28.99
CDY45079 Canola extracellular, vacuole 33.16 28.77
CDX72929 Canola vacuole 32.11 28.11
CDX68260 Canola extracellular, vacuole 30.53 28.02
CDY41321 Canola extracellular 33.16 27.88
CDY22215 Canola extracellular 33.16 27.88
CDX96421 Canola vacuole 31.58 27.65
CDX82141 Canola vacuole 26.32 22.62
Protein Annotations
EnsemblPlants:CDY47579EnsemblPlantsGene:GSBRNA2T00087674001Gene3D:2.60.120.10GO:A0A078IDY5GO:GO:0003674GO:GO:0045735
InterPro:Cupin_1InterPro:IPR014710InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfPANTHER:PTHR31238PANTHER:PTHR31238:SF18
PFAM:PF00190ProteinID:CDY47579ProteinID:CDY47579.1SEG:segSignalP:SignalP-noTMSMART:SM00835
SUPFAM:SSF51182UniParc:UPI0004EE257FUniProt:A0A078IDY5MapMan:35.1::
Description
BnaA01g22650DBnaA01g22650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDY5]
Coordinates
chrLK032723:-:47718..48951
Molecular Weight (calculated)
20349.7 Da
IEP (calculated)
8.454
GRAVY (calculated)
0.046
Length
190 amino acids
Sequence
(BLAST)
001: MATSMIYLIV TILLVAADTA KAFAESNMLQ DFCVADLKGE KVNGYRCKDP AQVTQEDFYC LANAASTTNT TLGSAVTSAN VEKIPGLNTL GVSMSRVDYA
101: PGGLNPPHLH PRASEAIFVL EGRLFVGFLT TTGKLIYKHV NKGSQNPGAQ GVGLSLFGAN PPILDDLLAK AFYLEPQEIQ KVKGKFPIKK
Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.