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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96421 Canola vacuole 94.47 94.47
CDY11164 Canola extracellular, vacuole 87.56 91.79
CDX68260 Canola extracellular, vacuole 85.25 89.37
AT1G72610.1 Thale cress extracellular, vacuole 82.95 86.54
KRH06186 Soybean extracellular, vacuole 62.21 64.59
KRH47600 Soybean extracellular 61.75 64.11
CDY51841 Canola extracellular, plasma membrane, vacuole 59.45 61.14
CDY16549 Canola extracellular 58.99 60.66
CDX85429 Canola extracellular 58.99 60.66
CDY22866 Canola extracellular 58.99 60.66
CDX92448 Canola extracellular 58.99 60.66
CDY45080 Canola extracellular, plasma membrane, vacuole 58.99 60.66
CDX70935 Canola extracellular, vacuole 58.53 60.19
Os08t0460000-01 Rice extracellular 55.76 56.81
HORVU7Hr1G036720.1 Barley extracellular 55.3 56.6
TraesCS2D01G073700.1 Wheat extracellular 54.84 56.13
TraesCS7A01G178300.1 Wheat extracellular 54.84 56.13
TraesCS7B01G084000.1 Wheat plastid 54.84 56.13
TraesCS2B01G090300.1 Wheat extracellular 54.84 56.13
TraesCS7D01G180200.1 Wheat extracellular, vacuole 54.38 55.66
TraesCS2A01G075000.1 Wheat extracellular 54.38 55.4
TraesCS2D01G073600.1 Wheat extracellular 52.07 54.33
Zm00001d037513_P001 Maize plastid 52.53 53.77
CDY45079 Canola extracellular, vacuole 52.07 51.6
EES17780 Sorghum extracellular, vacuole 52.53 51.58
CDY27880 Canola extracellular 49.77 50.94
CDY45077 Canola extracellular 49.77 50.94
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 59.45 50.39
CDX82141 Canola vacuole 51.15 50.23
GSMUA_Achr2P18710_001 Banana extracellular 57.14 49.6
CDY21688 Canola extracellular 38.25 38.78
CDY19265 Canola extracellular 37.79 38.32
CDX81907 Canola extracellular 37.79 38.32
CDY26706 Canola extracellular 36.87 37.38
CDX89983 Canola extracellular, vacuole 36.41 36.24
CDY15231 Canola extracellular, vacuole 35.94 35.78
CDY22633 Canola extracellular 35.48 35.65
CDY11392 Canola extracellular 35.94 35.45
CDX76609 Canola extracellular 35.94 35.45
CDY20692 Canola extracellular 35.94 35.45
CDY06361 Canola extracellular 35.02 35.19
CDY31080 Canola extracellular 35.48 35.16
CDX87040 Canola extracellular 35.02 35.02
CDY19762 Canola extracellular 34.56 34.56
CDX93502 Canola extracellular 35.48 34.53
CDY50897 Canola extracellular 35.02 34.39
CDY18833 Canola extracellular 34.1 33.95
CDY05327 Canola vacuole 29.95 33.51
CDY05519 Canola extracellular 33.64 33.49
CDY61117 Canola extracellular 33.64 33.49
CDY05213 Canola extracellular 33.18 33.03
CDX80572 Canola extracellular 33.18 33.03
CDX74123 Canola extracellular 32.72 32.57
CDY47579 Canola extracellular 28.11 32.11
CDY49987 Canola extracellular 31.34 31.19
CDY22215 Canola extracellular 32.26 30.97
CDY41321 Canola extracellular 32.26 30.97
CDX68163 Canola extracellular 30.88 30.59
CDX85858 Canola extracellular 29.95 28.38
CDY34891 Canola vacuole 23.96 27.37
CDY07800 Canola vacuole 23.04 26.18
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078C9Q5EnsemblPlants:CDX72929ProteinID:CDX72929ProteinID:CDX72929.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0030145GO:GO:0045735EnsemblPlantsGene:GSBRNA2T00103354001
InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
PANTHER:PTHR31238PANTHER:PTHR31238:SF92InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182
SignalP:SignalP-noTMUniParc:UPI0004EE9805SEG:seg:::
Description
BnaC06g33770D
Coordinates
chrLK031797:-:1202372..1203193
Molecular Weight (calculated)
22946.1 Da
IEP (calculated)
10.055
GRAVY (calculated)
0.486
Length
217 amino acids
Sequence
(BLAST)
001: MLRIIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKASDFV FSLGTPGNTT NIISAAVTPG FVAQFPALNG LGISTARLDL APKGVIPMHT
101: HPGASEVLFV LDGSITAGFI SSANSVYVQT LKPGQVMVFP QGLLHFQINA GKSAAVAFVT FSSASPGLQI LDFALFANSL STELVSATTF LDPKVIKTLK
201: GSHRLCLLAK TKYKHSP
Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Arabidopsis Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.