Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036586.1-P | Field mustard | extracellular | 99.54 | 99.54 |
| CDX87040 | Canola | extracellular | 98.62 | 98.62 |
| CDY61117 | Canola | extracellular | 89.4 | 88.99 |
| CDY05519 | Canola | extracellular | 88.94 | 88.53 |
| CDX80572 | Canola | extracellular | 88.94 | 88.53 |
| AT5G26700.1 | Thale cress | extracellular, vacuole | 82.95 | 84.51 |
| CDY05327 | Canola | vacuole | 74.19 | 82.99 |
| CDY18833 | Canola | extracellular | 61.75 | 61.47 |
| CDY05213 | Canola | extracellular | 61.29 | 61.01 |
| CDY06361 | Canola | extracellular | 58.53 | 58.8 |
| CDY49987 | Canola | extracellular | 58.99 | 58.72 |
| CDX74123 | Canola | extracellular | 58.53 | 58.26 |
| CDY22633 | Canola | extracellular | 57.6 | 57.87 |
| CDY47579 | Canola | extracellular | 49.77 | 56.84 |
| CDY50897 | Canola | extracellular | 57.6 | 56.56 |
| CDX93502 | Canola | extracellular | 57.6 | 56.05 |
| CDY31080 | Canola | extracellular | 56.22 | 55.71 |
| CDY20692 | Canola | extracellular | 56.22 | 55.45 |
| CDX76609 | Canola | extracellular | 54.38 | 53.64 |
| CDY11392 | Canola | extracellular | 53.46 | 52.73 |
| CDX89983 | Canola | extracellular, vacuole | 52.07 | 51.83 |
| CDY15231 | Canola | extracellular, vacuole | 51.61 | 51.38 |
| CDX81907 | Canola | extracellular | 39.63 | 40.19 |
| CDY21688 | Canola | extracellular | 39.63 | 40.19 |
| CDY19265 | Canola | extracellular | 39.17 | 39.72 |
| CDY26706 | Canola | extracellular | 39.17 | 39.72 |
| CDY51841 | Canola | extracellular, plasma membrane, vacuole | 37.33 | 38.39 |
| CDY45080 | Canola | extracellular, plasma membrane, vacuole | 37.33 | 38.39 |
| CDX68260 | Canola | extracellular, vacuole | 35.94 | 37.68 |
| CDX70935 | Canola | extracellular, vacuole | 36.41 | 37.44 |
| CDX85429 | Canola | extracellular | 36.41 | 37.44 |
| CDY22866 | Canola | extracellular | 36.41 | 37.44 |
| CDX92448 | Canola | extracellular | 36.41 | 37.44 |
| CDY16549 | Canola | extracellular | 36.41 | 37.44 |
| CDY11164 | Canola | extracellular, vacuole | 35.48 | 37.2 |
| CDY27880 | Canola | extracellular | 35.94 | 36.79 |
| CDY45077 | Canola | extracellular | 35.94 | 36.79 |
| CDY22215 | Canola | extracellular | 37.79 | 36.28 |
| CDY41321 | Canola | extracellular | 37.79 | 36.28 |
| CDY45079 | Canola | extracellular, vacuole | 35.94 | 35.62 |
| CDX96421 | Canola | vacuole | 35.02 | 35.02 |
| CDX72929 | Canola | vacuole | 34.56 | 34.56 |
| CDX68163 | Canola | extracellular | 34.1 | 33.79 |
| CDY34891 | Canola | vacuole | 29.49 | 33.68 |
| CDY07800 | Canola | vacuole | 28.57 | 32.46 |
| CDX85858 | Canola | extracellular | 32.72 | 31.0 |
| CDX82141 | Canola | vacuole | 25.35 | 24.89 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | GO:A0A078G426 | UniProt:A0A078G426 | EnsemblPlants:CDY19762 | ProteinID:CDY19762 |
| ProteinID:CDY19762.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00009508001 | InterPro:Germin | InterPro:Germin_Mn-BS |
| InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF18 |
| InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI0004EDEFB3 |
Description
BnaA09g04150DBnaA09g04150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G426]
Coordinates
chrLK032100:+:269230..269958
Molecular Weight (calculated)
23055.0 Da
IEP (calculated)
9.569
GRAVY (calculated)
0.204
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTATHLVV VFTMLVSAMA VAESNMLQDF CVADLSNAVK VNGYTCKDST QVTPEDFYFQ GLATAKAAAN SSTGAIVTGA TVEKLPGLNT LGLSMSRIDY
101: APNGLNPPHV HPRASEVIFV LEGQLYVGFV TTAGKLVAKY INKGEVFVFP KGLLHFQKNI AGSAPASVLA AFDSQLPGTQ SLVASLFGAL PDNILVESFK
201: IKPKQVKTIK SRYQPKK
101: APNGLNPPHV HPRASEVIFV LEGQLYVGFV TTAGKLVAKY INKGEVFVFP KGLLHFQKNI AGSAPASVLA AFDSQLPGTQ SLVASLFGAL PDNILVESFK
201: IKPKQVKTIK SRYQPKK
001: MASFATHLVV VVTMLFVAMA SAEMLQDVCV ADLSNAVKVN GYTCKDSTQI TPEDFYFKGL ANIAATNTST GSVVTGANVE KLPGLNTLGL SMSRIDYAPN
101: GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
201: QVKKIKLRYA PKK
101: GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
201: QVKKIKLRYA PKK
Arabidopsis Description
Probable germin-like protein subfamily 2 member 5 [Source:UniProtKB/Swiss-Prot;Acc:O65252]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.