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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020115.1-P Field mustard extracellular 100.0 100.0
CDY45077 Canola extracellular 100.0 100.0
CDY45079 Canola extracellular, vacuole 85.38 82.65
CDY45080 Canola extracellular, plasma membrane, vacuole 78.3 78.67
CDY22866 Canola extracellular 77.36 77.73
CDY51841 Canola extracellular, plasma membrane, vacuole 77.36 77.73
CDY16549 Canola extracellular 77.36 77.73
CDX92448 Canola extracellular 77.36 77.73
CDX85429 Canola extracellular 77.36 77.73
CDX70935 Canola extracellular, vacuole 75.47 75.83
AT5G20630.1 Thale cress extracellular, plasma membrane, vacuole 75.0 75.36
KRH02617 Soybean nucleus 61.32 62.5
KRH12528 Soybean extracellular 61.32 61.03
PGSC0003DMT400036428 Potato extracellular 55.66 56.73
PGSC0003DMT400030317 Potato extracellular 55.19 56.25
VIT_09s0002g01320.t01 Wine grape extracellular 54.72 55.5
Solyc03g123410.1.1 Tomato nucleus 53.77 54.81
TraesCS7D01G180200.1 Wheat extracellular, vacuole 54.72 54.72
TraesCS7B01G084000.1 Wheat plastid 54.25 54.25
TraesCS7A01G178300.1 Wheat extracellular 54.25 54.25
CDX68260 Canola extracellular, vacuole 52.83 54.11
TraesCS2B01G090300.1 Wheat extracellular 53.77 53.77
HORVU7Hr1G036720.1 Barley extracellular 53.77 53.77
VIT_18s0086g00590.t01 Wine grape cytosol 31.13 53.66
VIT_18s0086g00410.t01 Wine grape extracellular 52.83 53.59
TraesCS2D01G073700.1 Wheat extracellular 53.3 53.3
CDY11164 Canola extracellular, vacuole 51.42 52.66
TraesCS2A01G075000.1 Wheat extracellular 52.83 52.58
Os08t0460000-01 Rice extracellular 52.83 52.58
VIT_09s0002g01330.t01 Wine grape cytosol, extracellular, nucleus 24.53 52.53
TraesCS2D01G073600.1 Wheat extracellular 51.42 52.4
Zm00001d037513_P001 Maize plastid 50.47 50.47
CDX72929 Canola vacuole 50.94 49.77
CDX96421 Canola vacuole 50.94 49.77
KRH19305 Soybean cytosol, extracellular, plastid 50.94 49.77
EES17780 Sorghum extracellular, vacuole 51.42 49.32
VIT_07s0005g05920.t01 Wine grape extracellular 48.11 48.8
VIT_07s0005g05930.t01 Wine grape extracellular 47.17 47.85
VIT_07s0005g05910.t01 Wine grape extracellular 47.17 47.85
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 55.19 45.7
GSMUA_Achr2P18710_001 Banana extracellular 53.3 45.2
VIT_12s0059g00740.t01 Wine grape cytosol 25.94 44.72
VIT_09s0002g01340.t01 Wine grape extracellular, vacuole 46.7 39.92
CDY06361 Canola extracellular 38.68 37.96
CDY22633 Canola extracellular 38.21 37.5
CDY20692 Canola extracellular 38.68 37.27
CDY21688 Canola extracellular 37.26 36.92
CDY19265 Canola extracellular 37.26 36.92
CDX81907 Canola extracellular 37.26 36.92
CDY11392 Canola extracellular 38.21 36.82
CDX93502 Canola extracellular 38.68 36.77
CDY18833 Canola extracellular 37.74 36.7
CDY50897 Canola extracellular 38.21 36.65
CDX87040 Canola extracellular 37.26 36.41
CDX76609 Canola extracellular 37.74 36.36
CDY05519 Canola extracellular 37.26 36.24
CDY31080 Canola extracellular 37.26 36.07
CDY26706 Canola extracellular 36.32 35.98
CDY19762 Canola extracellular 36.79 35.94
CDY47579 Canola extracellular 32.08 35.79
CDY61117 Canola extracellular 36.79 35.78
CDX89983 Canola extracellular, vacuole 36.79 35.78
CDY15231 Canola extracellular, vacuole 36.79 35.78
CDX80572 Canola extracellular 36.32 35.32
CDY05327 Canola vacuole 32.08 35.05
CDY05213 Canola extracellular 35.38 34.4
CDY49987 Canola extracellular 34.91 33.95
CDX74123 Canola extracellular 34.91 33.95
CDY41321 Canola extracellular 34.91 32.74
CDY22215 Canola extracellular 34.91 32.74
CDX82141 Canola vacuole 33.49 32.13
CDY07800 Canola vacuole 28.3 31.41
CDX68163 Canola extracellular 32.08 31.05
CDY34891 Canola vacuole 26.89 30.0
CDX85858 Canola extracellular 31.13 28.82
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078I4Y5UniProt:A0A078I4Y5EnsemblPlants:CDY27880ProteinID:CDY27880
ProteinID:CDY27880.1ProteinID:CDY45077.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575
GO:GO:0005576GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00038729001InterPro:Germin
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325PANTHER:PTHR31238PANTHER:PTHR31238:SF92InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI00025433B9SEG:seg
Description
BnaA07g04700DBnaA02g04990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4Y5]
Coordinates
chrLK032211:-:180318..181146
Molecular Weight (calculated)
22088.8 Da
IEP (calculated)
8.243
GRAVY (calculated)
0.411
Length
212 amino acids
Sequence
(BLAST)
001: MKMMIINIFF ILSLVSSISF ASVQDFCVAD PSGPQGPSGF SCKNPDQVTA NDFAFSGLAK AGNTSNMIKA AVTTAFAPAF SGVNGLGISV VRLDLAAGGV
101: VPLHIHRGAS EVLIVIEGTI RGGFISSDNK VYLKTLQKGE VIVFPQGLLH FALNNGTGPA LAFAALGSSN PGVQLVPSAL FASDLPSELV EATTFLSREE
201: IRRLKRVFGG SN
Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Arabidopsis Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.