Factsheet for TraesCS2B01G090300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G073700.1	Wheat	extracellular	96.23	96.23
TraesCS2A01G075000.1	Wheat	extracellular	95.75	95.31
TraesCS2D01G073600.1	Wheat	extracellular	93.4	95.19
HORVU7Hr1G036720.1	Barley	extracellular	94.34	94.34
TraesCS7B01G084000.1	Wheat	plastid	93.87	93.87
Os08t0460000-01	Rice	extracellular	88.21	87.79
Zm00001d037513_P001	Maize	plastid	82.08	82.08
EES17780	Sorghum	extracellular, vacuole	82.08	78.73
VIT_11s0016g01220.t01	Wine grape	extracellular	64.62	65.87
KRH02617	Soybean	nucleus	63.21	64.42
TraesCS2B01G616500.1	Wheat	extracellular	63.68	62.21
KRH06186	Soybean	extracellular, vacuole	60.38	61.24
Solyc07g041720.1.1	Tomato	nucleus, plastid	60.85	61.14
CDY51841	Canola	extracellular, plasma membrane, vacuole	60.85	61.14
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.85	61.14
PGSC0003DMT400036428	Potato	extracellular	59.91	61.06
PGSC0003DMT400033858	Potato	extracellular	60.38	60.66
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.38	60.66
CDY45080	Canola	extracellular, plasma membrane, vacuole	60.38	60.66
PGSC0003DMT400030317	Potato	extracellular	59.43	60.58
CDX68260	Canola	extracellular, vacuole	58.96	60.39
KRH47600	Soybean	extracellular	59.43	60.29
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	59.91	60.19
CDX70935	Canola	extracellular, vacuole	59.91	60.19
AT1G72610.1	Thale cress	extracellular, vacuole	58.96	60.1
Solyc03g123410.1.1	Tomato	nucleus	58.96	60.1
KRH12528	Soybean	extracellular	59.91	59.62
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	27.83	59.6
Bra003874.1-P	Field mustard	extracellular	58.02	59.42
CDY11164	Canola	extracellular, vacuole	58.02	59.42
CDX92448	Canola	extracellular	58.96	59.24
Bra002316.1-P	Field mustard	extracellular	58.96	59.24
CDX85429	Canola	extracellular	58.96	59.24
CDY16549	Canola	extracellular	58.96	59.24
CDY22866	Canola	extracellular	58.96	59.24
VIT_18s0086g00590.t01	Wine grape	cytosol	33.96	58.54
VIT_18s0086g00410.t01	Wine grape	extracellular	57.55	58.37
VIT_09s0002g01320.t01	Wine grape	extracellular	57.55	58.37
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	69.81	57.81
GSMUA_Achr2P18710_001	Banana	extracellular	67.45	57.2
CDX96421	Canola	vacuole	56.13	54.84
CDX72929	Canola	vacuole	56.13	54.84
Bra016047.1-P	Field mustard	vacuole	56.13	54.84
KRH19305	Soybean	cytosol, extracellular, plastid	55.19	53.92
CDY45077	Canola	extracellular	53.77	53.77
CDY27880	Canola	extracellular	53.77	53.77
Bra020115.1-P	Field mustard	extracellular	53.77	53.77
VIT_07s0005g05920.t01	Wine grape	extracellular	52.36	53.11
VIT_07s0005g05910.t01	Wine grape	extracellular	51.42	52.15
VIT_07s0005g05930.t01	Wine grape	extracellular	51.42	52.15
CDY45079	Canola	extracellular, vacuole	53.77	52.05
Bra020114.1-P	Field mustard	extracellular, vacuole	53.77	52.05
VIT_12s0059g00740.t01	Wine grape	cytosol	29.25	50.41
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	50.94	43.55
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	37.74	42.55
TraesCS6B01G421200.1	Wheat	extracellular	42.92	42.13
TraesCS6B01G420800.1	Wheat	extracellular	42.92	42.13
TraesCS6B01G422000.1	Wheat	extracellular	42.45	41.67
TraesCS6B01G422100.1	Wheat	extracellular	42.45	41.67
TraesCS1B01G098000.1	Wheat	extracellular	43.4	40.71
TraesCS6B01G420700.1	Wheat	extracellular	40.57	39.81
TraesCS3B01G543700.1	Wheat	extracellular	40.57	38.22
TraesCS3B01G544000.1	Wheat	extracellular	41.04	37.99
TraesCS3B01G544200.1	Wheat	extracellular	40.09	37.78
TraesCS3B01G543800.1	Wheat	extracellular	40.09	37.78
TraesCS3B01G543600.1	Wheat	extracellular	39.62	37.5
TraesCS3B01G200200.1	Wheat	extracellular	38.21	36.82
TraesCS3B01G285200.1	Wheat	extracellular	38.21	36.49
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	39.15	36.09
TraesCS3B01G282500.1	Wheat	extracellular	36.79	34.82
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	36.79	34.82
CDX82141	Canola	vacuole	35.85	34.39
TraesCS4B01G033300.1	Wheat	extracellular	36.32	34.38
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	36.32	34.38
TraesCS4B01G033600.1	Wheat	extracellular, unclear	35.85	33.93
TraesCS4B01G033400.1	Wheat	extracellular	36.79	33.62
TraesCS4B01G033500.1	Wheat	cytosol	20.28	33.59
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	32.08	33.5
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	35.38	33.48
TraesCS3B01G282300.1	Wheat	extracellular	31.13	32.2
TraesCS6B01G041100.1	Wheat	extracellular	33.96	31.58
TraesCS4B01G294100.1	Wheat	extracellular	32.08	30.49

Protein Annotations

EnsemblPlants:TraesCS2B01G090300.1	EnsemblPlantsGene:TraesCS2B01G090300	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF2	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr2B:+:51228758..51229396

Molecular Weight (calculated)

21796.3 Da

IEP (calculated)

5.487

GRAVY (calculated)

0.486

Length

212 amino acids

Sequence
(BLAST)

001: MANAMLLPAL ISFLILPFSS LALTQDFCVA DLACPDTPAG YPCKPGVGAG DFYYHGLAAA GNTNNLIKAA VTPAFVGQFP GVNGLGISAA RLDIAVGGVV
101: PLHTHPAASE LLFVTEGTIL AGFISSSSNT VYTKTLYKGD IMVFPQGLLH YQYNGGSSPA VALVAFSGPN PGLQITDYAL FANNLPSAVV ETVTFLDDAQ
201: VKKLKSVLGG TG

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.