Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 87.89 | 92.89 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 92.83 | 90.0 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 83.41 | 79.15 |
| Os03t0179100-00 | Rice | extracellular, vacuole | 75.78 | 75.11 |
| Zm00001d027890_P001 | Maize | extracellular, vacuole | 70.4 | 68.26 |
| EER95401 | Sorghum | vacuole | 72.2 | 66.81 |
| VIT_01s0026g00970.t01 | Wine grape | extracellular | 56.05 | 56.56 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 58.3 | 54.62 |
| PGSC0003DMT400058298 | Potato | extracellular, vacuole | 48.43 | 51.18 |
| Solyc05g006500.2.1 | Tomato | extracellular | 49.78 | 50.45 |
| KRH74710 | Soybean | extracellular | 48.43 | 49.09 |
| KRH69437 | Soybean | extracellular | 47.53 | 48.18 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 44.39 | 45.62 |
| Bra031713.1-P | Field mustard | vacuole | 35.87 | 42.11 |
| CDY34891 | Canola | vacuole | 35.87 | 42.11 |
| CDY07800 | Canola | vacuole | 34.08 | 39.79 |
| TraesCS6B01G421300.1 | Wheat | cytosol, extracellular, plastid | 33.18 | 39.36 |
| TraesCS3B01G200200.1 | Wheat | extracellular | 36.32 | 36.82 |
| TraesCS6B01G420700.1 | Wheat | extracellular | 35.43 | 36.57 |
| TraesCS6B01G421200.1 | Wheat | extracellular | 34.98 | 36.11 |
| TraesCS4B01G033500.1 | Wheat | cytosol | 20.63 | 35.94 |
| TraesCS1B01G098000.1 | Wheat | extracellular | 36.32 | 35.84 |
| TraesCS6B01G420800.1 | Wheat | extracellular | 34.53 | 35.65 |
| TraesCS3B01G285200.1 | Wheat | extracellular | 35.43 | 35.59 |
| TraesCS6B01G422100.1 | Wheat | extracellular | 34.08 | 35.19 |
| TraesCS6B01G422000.1 | Wheat | extracellular | 34.08 | 35.19 |
| TraesCS3B01G543700.1 | Wheat | extracellular | 35.43 | 35.11 |
| TraesCS3B01G543600.1 | Wheat | extracellular | 34.98 | 34.82 |
| TraesCS4B01G033100.1 | Wheat | extracellular, vacuole | 34.98 | 34.82 |
| TraesCS3B01G543800.1 | Wheat | extracellular | 34.98 | 34.67 |
| TraesCS3B01G544200.1 | Wheat | extracellular | 34.98 | 34.67 |
| TraesCS2B01G127000.1 | Wheat | extracellular, vacuole | 31.39 | 34.48 |
| TraesCS3B01G282500.1 | Wheat | extracellular | 34.53 | 34.38 |
| TraesCS3B01G282400.1 | Wheat | extracellular, vacuole | 34.53 | 34.38 |
| TraesCS4B01G033300.1 | Wheat | extracellular | 34.08 | 33.93 |
| TraesCS4B01G033600.1 | Wheat | extracellular, unclear | 34.08 | 33.93 |
| TraesCS6B01G041100.1 | Wheat | extracellular | 34.53 | 33.77 |
| TraesCS7B01G084000.1 | Wheat | plastid | 31.84 | 33.49 |
| TraesCS5B01G462200.1 | Wheat | extracellular, vacuole | 34.53 | 33.48 |
| TraesCS4B01G033400.1 | Wheat | extracellular | 34.08 | 32.76 |
| TraesCS3B01G544000.1 | Wheat | extracellular | 33.63 | 32.75 |
| TraesCS2B01G616500.1 | Wheat | extracellular | 31.84 | 32.72 |
| TraesCS4B01G033200.1 | Wheat | extracellular, vacuole | 32.74 | 32.59 |
| TraesCS2B01G090300.1 | Wheat | extracellular | 30.49 | 32.08 |
| TraesCS3B01G282300.1 | Wheat | extracellular | 28.7 | 31.22 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G294100.1 | EnsemblPlantsGene:TraesCS4B01G294100 | Gene3D:2.60.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Cupin_1 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll |
| InterPro:RmlC_Cupin_sf | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF5 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
| SignalP:SignalP-noTM | SMART:SM00835 | SUPFAM:SSF51182 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4B:+:579459672..579460343
Molecular Weight (calculated)
23370.0 Da
IEP (calculated)
5.979
GRAVY (calculated)
0.253
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MITAGAILSL VMIIFFSTVC NSDPDLLFDY CVADTTSAAA SFHFNGLPCI DPATACADHF ATSALSEPTD PSATLFGFNA TMTSPAASLP GANAQGLAMA
101: RVDLAPGGMA PLHSHPRASE VALVISGGVL VGFADTSYRL YTQRLRAGEA FVFPRGMVHF MRNEDASSPA VVLSGLNSQN PGAQLVPFSA FLTEPRLPDE
201: VVKKTFRITG QGVQRIQRSL GGS
101: RVDLAPGGMA PLHSHPRASE VALVISGGVL VGFADTSYRL YTQRLRAGEA FVFPRGMVHF MRNEDASSPA VVLSGLNSQN PGAQLVPFSA FLTEPRLPDE
201: VVKKTFRITG QGVQRIQRSL GGS
001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
Arabidopsis Description
GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.