Factsheet for TraesCS1B01G098000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G081700.1	Wheat	extracellular	96.46	97.32
TraesCS1A01G080000.1	Wheat	extracellular	95.58	96.43
Os05t0277500-01	Rice	extracellular	82.74	84.62
GSMUA_AchrUn_...	Banana	extracellular	71.68	74.31
GSMUA_Achr1P25160_001	Banana	extracellular	71.68	73.97
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	70.35	73.61
GSMUA_Achr5P18440_001	Banana	extracellular	70.35	72.6
Zm00001d018954_P002	Maize	extracellular	73.45	71.86
EER95948	Sorghum	extracellular	73.45	71.86
KRH68383	Soybean	nucleus	69.03	71.56
TraesCS3B01G200200.1	Wheat	extracellular	69.47	71.36
GSMUA_Achr8P29820_001	Banana	extracellular	72.57	71.3
VIT_14s0060g00120.t01	Wine grape	extracellular	68.14	70.97
KRH33715	Soybean	nucleus	68.58	69.51
KRG96655	Soybean	extracellular, vacuole	67.26	69.41
KRG90420	Soybean	extracellular, nucleus	68.58	69.2
PGSC0003DMT400047067	Potato	cytosol	63.27	67.77
PGSC0003DMT400047065	Potato	cytosol, extracellular	62.39	67.14
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	55.75	67.02
CDX76609	Canola	extracellular	64.6	66.36
CDY11392	Canola	extracellular	64.16	65.91
Bra007652.1-P	Field mustard	extracellular	64.16	65.91
AT3G62020.1	Thale cress	extracellular, vacuole	63.72	65.45
TraesCS6B01G420700.1	Wheat	extracellular	62.39	65.28
Solyc01g102400.2.1	Tomato	extracellular	63.27	65.0
Solyc01g102390.2.1	Tomato	extracellular	63.27	65.0
VIT_07s0005g02380.t01	Wine grape	extracellular	62.39	64.98
TraesCS6B01G422100.1	Wheat	extracellular	61.5	64.35
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	95.13	64.18
AT1G02335.1	Thale cress	extracellular, vacuole	61.95	63.93
TraesCS6B01G422000.1	Wheat	extracellular	61.06	63.89
CDY06361	Canola	extracellular	61.06	63.89
Bra031671.1-P	Field mustard	extracellular	61.06	63.89
CDY31080	Canola	extracellular	61.5	63.47
KRH33687	Soybean	extracellular	61.95	63.35
CDX89983	Canola	extracellular, vacuole	61.06	63.3
Bra033314.1-P	Field mustard	extracellular, vacuole	61.06	63.3
KRH33688	Soybean	extracellular	61.5	63.18
CDY20692	Canola	extracellular	61.5	63.18
Bra030785.1-P	Field mustard	extracellular	61.5	63.18
KRG96631	Soybean	extracellular, vacuole	51.33	63.04
AT1G09560.1	Thale cress	extracellular	61.06	63.01
CDY22633	Canola	extracellular	60.18	62.96
CDY15231	Canola	extracellular, vacuole	60.62	62.84
CDX93502	Canola	extracellular	61.5	62.33
Bra020014.1-P	Field mustard	extracellular	61.06	61.88
CDY50897	Canola	extracellular	60.18	61.54
TraesCS6B01G421200.1	Wheat	extracellular	58.41	61.11
VIT_07s0005g02370.t01	Wine grape	extracellular	58.41	60.83
TraesCS6B01G420800.1	Wheat	extracellular	57.96	60.65
TraesCS3B01G543600.1	Wheat	extracellular	58.85	59.38
Solyc01g102380.2.1	Tomato	extracellular	58.85	59.38
TraesCS3B01G544200.1	Wheat	extracellular	58.85	59.11
TraesCS3B01G543800.1	Wheat	extracellular	58.41	58.67
TraesCS3B01G543700.1	Wheat	extracellular	57.96	58.22
KRH69151	Soybean	cytosol	39.38	58.17
TraesCS3B01G544000.1	Wheat	extracellular	52.65	51.97
TraesCS4B01G033500.1	Wheat	cytosol	27.43	48.44
TraesCS4B01G033600.1	Wheat	extracellular, unclear	47.35	47.77
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	47.35	47.77
TraesCS4B01G033300.1	Wheat	extracellular	46.46	46.88
TraesCS3B01G282500.1	Wheat	extracellular	46.46	46.88
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	46.02	46.43
TraesCS4B01G033400.1	Wheat	extracellular	47.35	46.12
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	45.58	45.98
TraesCS3B01G282300.1	Wheat	extracellular	39.38	43.41
TraesCS2B01G090300.1	Wheat	extracellular	40.71	43.4
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	38.5	42.86
TraesCS7B01G084000.1	Wheat	plastid	39.38	41.98
TraesCS3B01G285200.1	Wheat	extracellular	41.15	41.89
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	40.71	40.0
TraesCS2B01G616500.1	Wheat	extracellular	38.05	39.63
TraesCS6B01G041100.1	Wheat	extracellular	38.5	38.16
TraesCS4B01G294100.1	Wheat	extracellular	35.84	36.32

Protein Annotations

EnsemblPlants:TraesCS1B01G098000.1	EnsemblPlantsGene:TraesCS1B01G098000	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr1B:-:104721247..104722018

Molecular Weight (calculated)

23285.1 Da

IEP (calculated)

7.506

GRAVY (calculated)

0.241

Length

226 amino acids

Sequence
(BLAST)

001: MGMGTGMASP LLSCAIMALL ASVLPPPSVA GDPDLLQDIC VADLSSSVKV NGFACKATVT EDDFYFKGLG AAGNTNTTYG SVVTGANVEK VPGLNTLGVS
101: MARIDYAPGG LNAPHTHPRA TEMVFVLEGA LDVGFITTGN KLVSKTISAG DVFVFPRGLV HFQKNNGAGP ASVISAFNSQ FPGTQSLAMT LFAATPPVPD
201: HVLTTAFQVG TKEVEKIKSR LAPKKA

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.