Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007652.1-P | Field mustard | extracellular | 94.55 | 94.55 |
| CDY11392 | Canola | extracellular | 94.09 | 94.09 |
| CDX76609 | Canola | extracellular | 93.18 | 93.18 |
| AT1G02335.1 | Thale cress | extracellular, vacuole | 70.91 | 71.23 |
| KRH33687 | Soybean | extracellular | 67.73 | 67.42 |
| VIT_07s0005g02380.t01 | Wine grape | extracellular | 66.36 | 67.28 |
| TraesCS3D01G176100.1 | Wheat | extracellular | 67.27 | 67.27 |
| TraesCS3B01G200200.1 | Wheat | extracellular | 67.27 | 67.27 |
| TraesCS3A01G165500.1 | Wheat | extracellular | 65.91 | 65.91 |
| KRH33688 | Soybean | extracellular | 65.45 | 65.45 |
| TraesCS1D01G081700.1 | Wheat | extracellular | 65.45 | 64.29 |
| Os05t0277500-01 | Rice | extracellular | 64.55 | 64.25 |
| KRG96631 | Soybean | extracellular, vacuole | 53.64 | 64.13 |
| TraesCS1B01G098000.1 | Wheat | extracellular | 65.45 | 63.72 |
| TraesCS1A01G080000.1 | Wheat | extracellular | 64.55 | 63.39 |
| AT1G09560.1 | Thale cress | extracellular | 62.27 | 62.56 |
| Os01t0249200-01 | Rice | extracellular | 64.55 | 62.56 |
| KRH69151 | Soybean | cytosol | 42.73 | 61.44 |
| EES02420 | Sorghum | extracellular | 61.82 | 60.18 |
| VIT_07s0005g02370.t01 | Wine grape | extracellular | 59.09 | 59.91 |
| EER95948 | Sorghum | extracellular | 60.45 | 57.58 |
| Zm00001d018954_P002 | Maize | extracellular | 59.55 | 56.71 |
| AT3G05930.1 | Thale cress | extracellular | 55.91 | 56.16 |
| AT5G26700.1 | Thale cress | extracellular, vacuole | 54.09 | 55.87 |
| HORVU3Hr1G034100.2 | Barley | cytosol, plastid | 63.64 | 53.03 |
| AT1G18980.1 | Thale cress | extracellular | 48.18 | 48.18 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 46.36 | 46.36 |
| KXG32174 | Sorghum | plastid | 62.27 | 43.35 |
| HORVU1Hr1G017170.1 | Barley | extracellular, plastid, vacuole | 65.0 | 42.69 |
| AT5G20630.1 | Thale cress | extracellular, plasma membrane, vacuole | 37.73 | 39.34 |
| AT1G72610.1 | Thale cress | extracellular, vacuole | 36.36 | 38.46 |
| AT1G74820.1 | Thale cress | extracellular | 35.91 | 34.8 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 33.18 | 33.64 |
| AT3G10080.2 | Thale cress | mitochondrion | 34.55 | 25.5 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:825375 | UniProt:A0A178VLQ9 | UniProt:A0JQ09 | ProteinID:AEE80296.1 |
| ArrayExpress:AT3G62020 | EnsemblPlantsGene:AT3G62020 | RefSeq:AT3G62020 | TAIR:AT3G62020 | RefSeq:AT3G62020-TAIR-G | EnsemblPlants:AT3G62020.1 |
| TAIR:AT3G62020.1 | Unigene:At.48796 | EMBL:BT029379 | ProteinID:CAB71909.1 | InterPro:Cupin_1 | Symbol:GLP10 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009505 | GO:GO:0009506 | GO:GO:0009987 |
| GO:GO:0010497 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 | GO:GO:0046872 | GO:GO:0048046 |
| GO:GO:2000280 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | RefSeq:NP_191761.1 | ProteinID:OAP06401.1 |
| PFAM:PF00190 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009062 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF18 | UniProt:Q9M263 |
| InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | EMBL:U95036 |
| UniParc:UPI000012B4DD | : | : | : | : | : |
Description
GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
Coordinates
chr3:-:22971358..22972303
Molecular Weight (calculated)
23551.4 Da
IEP (calculated)
9.184
GRAVY (calculated)
0.122
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.