Factsheet for TraesCS3A01G165500.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G200200.1	Wheat	extracellular	95.91	95.91
TraesCS3D01G176100.1	Wheat	extracellular	95.0	95.0
Os01t0249200-01	Rice	extracellular	82.73	80.18
EES02420	Sorghum	extracellular	79.55	77.43
GSMUA_Achr1P25160_001	Banana	extracellular	71.82	72.15
GSMUA_AchrUn_...	Banana	extracellular	70.45	71.1
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	69.55	70.83
TraesCS1A01G080000.1	Wheat	extracellular	71.36	70.09
GSMUA_Achr5P18440_001	Banana	extracellular	69.55	69.86
TraesCS6A01G382000.1	Wheat	cytosol	38.64	69.67
KRH68383	Soybean	nucleus	68.64	69.27
VIT_14s0060g00120.t01	Wine grape	extracellular	68.18	69.12
HORVU3Hr1G034100.2	Barley	cytosol, plastid	81.36	67.8
KRG96655	Soybean	extracellular, vacuole	67.27	67.58
CDX76609	Canola	extracellular	67.27	67.27
CDY11392	Canola	extracellular	66.36	66.36
Bra007652.1-P	Field mustard	extracellular	66.36	66.36
KRH33687	Soybean	extracellular	66.36	66.06
AT3G62020.1	Thale cress	extracellular, vacuole	65.91	65.91
CDY06361	Canola	extracellular	64.55	65.74
Bra031671.1-P	Field mustard	extracellular	64.55	65.74
PGSC0003DMT400047065	Potato	cytosol, extracellular	62.73	65.71
GSMUA_Achr8P29820_001	Banana	extracellular	68.64	65.65
KRG90420	Soybean	extracellular, nucleus	66.82	65.62
KRH33715	Soybean	nucleus	66.36	65.47
PGSC0003DMT400047067	Potato	cytosol	62.73	65.4
AT1G09560.1	Thale cress	extracellular	65.0	65.3
CDY22633	Canola	extracellular	64.09	65.28
TraesCS6A01G382200.1	Wheat	extracellular	64.09	65.28
VIT_07s0005g02380.t01	Wine grape	extracellular	64.09	64.98
KRH33688	Soybean	extracellular	64.55	64.55
CDY31080	Canola	extracellular	64.09	64.38
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	62.73	63.89
CDY50897	Canola	extracellular	64.09	63.8
CDX93502	Canola	extracellular	64.55	63.68
CDY20692	Canola	extracellular	63.64	63.64
Bra030785.1-P	Field mustard	extracellular	63.64	63.64
KRG96631	Soybean	extracellular, vacuole	53.18	63.59
AT1G02335.1	Thale cress	extracellular, vacuole	63.18	63.47
Bra020014.1-P	Field mustard	extracellular	64.09	63.23
Solyc01g102390.2.1	Tomato	extracellular	63.18	63.18
TraesCS6A01G382900.1	Wheat	extracellular	61.82	62.96
Solyc01g102400.2.1	Tomato	extracellular	62.73	62.73
Solyc01g102380.2.1	Tomato	extracellular	63.64	62.5
KRH69151	Soybean	cytosol	43.18	62.09
CDY15231	Canola	extracellular, vacuole	61.36	61.93
Bra033314.1-P	Field mustard	extracellular, vacuole	61.36	61.93
CDX89983	Canola	extracellular, vacuole	61.36	61.93
TraesCS3A01G040900.1	Wheat	extracellular	63.18	61.78
TraesCS6A01G383000.1	Wheat	extracellular	60.45	61.57
VIT_07s0005g02370.t01	Wine grape	extracellular	60.0	60.83
KXG32174	Sorghum	plastid	79.55	55.38
TraesCS4A01G181700.1	Wheat	extracellular	45.91	45.09
TraesCS4A01G181900.1	Wheat	extracellular	45.45	44.84
TraesCS4A01G279300.1	Wheat	extracellular	45.45	44.84
TraesCS4A01G279200.1	Wheat	extracellular	45.45	44.64
TraesCS4A01G279100.1	Wheat	extracellular	44.55	44.14
TraesCS2A01G109200.1	Wheat	extracellular	43.18	42.99
TraesCS3A01G253300.1	Wheat	extracellular	43.18	42.79
TraesCS2A01G211800.1	Wheat	extracellular	43.64	42.29
TraesCS5A01G453200.1	Wheat	extracellular	44.09	42.17
TraesCS4A01G278900.1	Wheat	extracellular, unclear	43.18	41.85
TraesCS4A01G181800.1	Wheat	extracellular	32.27	40.8
TraesCS4A01G181600.1	Wheat	mitochondrion	31.36	39.2
TraesCS6A01G028700.1	Wheat	extracellular, unclear	40.0	38.6
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	36.36	37.91
TraesCS7A01G178300.1	Wheat	extracellular	35.91	37.26
TraesCS2A01G075000.1	Wheat	extracellular	35.91	37.09

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF22	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G165500	EnsemblPlants:TraesCS3A01G165500.1	SEG:seg

Description

No Description!

Coordinates

chr3A:+:170648521..170649748

Molecular Weight (calculated)

23068.9 Da

IEP (calculated)

6.774

GRAVY (calculated)

0.214

Length

220 amino acids

Sequence
(BLAST)

001: MMMARVSSAL FLAMVALVLA VPALAGDPDY LQDICVADLK SDLKVNGFPC KANATADDFF TGVLAKPGAT NTTAGSVVTG ANVEKVPGLN TLGVSLSRID
101: YAPGGLNPPH THPRATEVVF VLYGELDVGF ITTANKLFAK TISQGDVFAF PRGLVHFQKN NGDKPAAVIS AFNSQLPSTQ SLAMTLCGAS PEVPDDVLAK
201: AFQIDTVEVD KIKAKFAPKK

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.