Factsheet for TraesCS6A01G382900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G422000.1	Wheat	extracellular	97.22	97.22
TraesCS6D01G367700.1	Wheat	extracellular	95.37	95.37
TraesCS6A01G383000.1	Wheat	extracellular	92.59	92.59
TraesCS6A01G382200.1	Wheat	extracellular	85.65	85.65
Os01t0284500-01	Rice	extracellular	84.72	84.72
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	83.8	83.8
TraesCS6A01G382000.1	Wheat	cytosol	47.22	83.61
Zm00001d008210_P002	Maize	extracellular	76.39	77.1
Zm00001d040519_P001	Maize	extracellular	76.85	76.15
EES02802	Sorghum	extracellular	75.93	74.89
TraesCS3A01G165500.1	Wheat	extracellular	62.96	61.82
TraesCS1A01G080000.1	Wheat	extracellular	63.43	61.16
TraesCS3A01G040900.1	Wheat	extracellular	61.11	58.67
TraesCS4A01G181900.1	Wheat	extracellular	49.07	47.53
TraesCS4A01G279300.1	Wheat	extracellular	49.07	47.53
TraesCS4A01G181700.1	Wheat	extracellular	48.61	46.88
TraesCS4A01G279200.1	Wheat	extracellular	48.15	46.43
TraesCS4A01G279100.1	Wheat	extracellular	47.69	46.4
TraesCS2A01G211800.1	Wheat	extracellular	47.22	44.93
TraesCS4A01G278900.1	Wheat	extracellular, unclear	47.22	44.93
TraesCS5A01G453200.1	Wheat	extracellular	46.76	43.91
TraesCS4A01G181800.1	Wheat	extracellular	34.72	43.1
TraesCS3A01G253300.1	Wheat	extracellular	43.98	42.79
TraesCS7A01G178300.1	Wheat	extracellular	41.67	42.45
TraesCS2A01G075000.1	Wheat	extracellular	41.2	41.78
TraesCS2A01G109200.1	Wheat	extracellular	42.13	41.18
TraesCS4A01G181600.1	Wheat	mitochondrion	33.33	40.91
TraesCS6A01G028700.1	Wheat	extracellular, unclear	40.74	38.6
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	35.19	36.02

Protein Annotations

EnsemblPlants:TraesCS6A01G382900.1	EnsemblPlantsGene:TraesCS6A01G382900	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:+:602075560..602076459

Molecular Weight (calculated)

22584.2 Da

IEP (calculated)

6.762

GRAVY (calculated)

0.358

Length

216 amino acids

Sequence
(BLAST)

001: MARLQLSVVA ACAVLLALVA PSIAGDPDML QDVCVADLAS PIKINGFPCK ANITADDFFF AGLKKAGNTN NPAGSVVTAA NVLSFPGVNT LGVSMARIDY
101: AVGGQNPPHT HPRATEIIFV TEGTLEVGFI TTANKLFTKV VTVGEVFVFP RGLVHFQQNR GNCSASVIAA FNSQLQGTQA IATTLLAATP PVPTDVLAKA
201: FRVDNEDIDA VKARFN

Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)

001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV

Arabidopsis Description

At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.