Factsheet for TraesCS6A01G382000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G421200.1	Wheat	extracellular	98.36	55.56
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	97.54	55.09
TraesCS6D01G366900.1	Wheat	vacuole	95.08	54.72
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	95.08	54.72
HORVU6Hr1G089450.1	Barley	extracellular	96.72	54.63
TraesCS6B01G420800.1	Wheat	extracellular	96.72	54.63
Os01t0284500-01	Rice	extracellular	89.34	50.46
TraesCS6A01G382200.1	Wheat	extracellular	88.52	50.0
TraesCS6A01G383000.1	Wheat	extracellular	85.25	48.15
TraesCS6A01G382900.1	Wheat	extracellular	83.61	47.22
Zm00001d040519_P001	Maize	extracellular	83.61	46.79
EES02802	Sorghum	extracellular	80.33	44.75
Zm00001d008210_P002	Maize	extracellular	77.87	44.39
TraesCS3A01G165500.1	Wheat	extracellular	69.67	38.64
TraesCS1A01G080000.1	Wheat	extracellular	68.03	37.05
TraesCS3A01G040900.1	Wheat	extracellular	63.93	34.67
TraesCS4A01G181600.1	Wheat	mitochondrion	46.72	32.39
TraesCS4A01G279300.1	Wheat	extracellular	50.0	27.35
TraesCS4A01G181700.1	Wheat	extracellular	50.0	27.23
TraesCS4A01G279200.1	Wheat	extracellular	50.0	27.23
TraesCS4A01G181900.1	Wheat	extracellular	49.18	26.91
TraesCS4A01G279100.1	Wheat	extracellular	48.36	26.58
TraesCS2A01G211800.1	Wheat	extracellular	48.36	25.99
TraesCS4A01G278900.1	Wheat	extracellular, unclear	48.36	25.99
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	44.26	25.59
TraesCS2A01G109200.1	Wheat	extracellular	44.26	24.43
TraesCS5A01G453200.1	Wheat	extracellular	45.9	24.35
TraesCS3A01G253300.1	Wheat	extracellular	44.26	24.32
TraesCS7A01G178300.1	Wheat	extracellular	41.8	24.06
TraesCS2A01G075000.1	Wheat	extracellular	41.8	23.94
TraesCS6A01G028700.1	Wheat	extracellular, unclear	42.62	22.81
TraesCS4A01G181800.1	Wheat	extracellular	31.15	21.84

Protein Annotations

EnsemblPlants:TraesCS6A01G382000.1	EnsemblPlantsGene:TraesCS6A01G382000	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6A:-:601240958..601241326

Molecular Weight (calculated)

13077.8 Da

IEP (calculated)

10.671

GRAVY (calculated)

0.116

Length

122 amino acids

Sequence
(BLAST)

001: MARIDYAPGG QNPPHTHPRA TEIIFVTQGV LEVGFITTAN KLFTKTVTVG DVFVFPRGLV HFQQNRGRGP ASVIAGFNSQ LQGTQVIATT LFAAAPPVPS
101: DVLAKAFRID NGQVDAIKAK FM

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.