Factsheet for TraesCS2A01G075000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G073700.1	Wheat	extracellular	99.06	99.53
TraesCS2B01G090300.1	Wheat	extracellular	95.31	95.75
TraesCS7A01G178300.1	Wheat	extracellular	93.43	93.87
HORVU7Hr1G036720.1	Barley	extracellular	92.96	93.4
Os08t0460000-01	Rice	extracellular	85.92	85.92
Zm00001d037513_P001	Maize	plastid	81.22	81.6
EES17780	Sorghum	extracellular, vacuole	79.81	76.92
VIT_11s0016g01220.t01	Wine grape	extracellular	63.85	65.38
KRH02617	Soybean	nucleus	62.44	63.94
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.09	60.66
CDY51841	Canola	extracellular, plasma membrane, vacuole	60.09	60.66
PGSC0003DMT400036428	Potato	extracellular	59.15	60.58
KRH06186	Soybean	extracellular, vacuole	59.15	60.29
CDY45080	Canola	extracellular, plasma membrane, vacuole	59.62	60.19
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.62	60.19
PGSC0003DMT400030317	Potato	extracellular	58.69	60.1
KRH47600	Soybean	extracellular	58.69	59.81
PGSC0003DMT400033858	Potato	extracellular	59.15	59.72
Solyc07g041720.1.1	Tomato	nucleus, plastid	59.15	59.72
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	59.15	59.72
CDX70935	Canola	extracellular, vacuole	59.15	59.72
KRH12528	Soybean	extracellular	59.62	59.62
Solyc03g123410.1.1	Tomato	nucleus	58.22	59.62
AT1G72610.1	Thale cress	extracellular, vacuole	58.22	59.62
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	27.7	59.6
CDX68260	Canola	extracellular, vacuole	57.75	59.42
CDY11164	Canola	extracellular, vacuole	57.75	59.42
Bra003874.1-P	Field mustard	extracellular	57.28	58.94
CDX92448	Canola	extracellular	58.22	58.77
CDX85429	Canola	extracellular	58.22	58.77
CDY16549	Canola	extracellular	58.22	58.77
CDY22866	Canola	extracellular	58.22	58.77
Bra002316.1-P	Field mustard	extracellular	58.22	58.77
VIT_18s0086g00590.t01	Wine grape	cytosol	33.8	58.54
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	69.01	57.42
GSMUA_Achr2P18710_001	Banana	extracellular	67.14	57.2
VIT_09s0002g01320.t01	Wine grape	extracellular	55.87	56.94
VIT_18s0086g00410.t01	Wine grape	extracellular	55.87	56.94
CDX72929	Canola	vacuole	55.4	54.38
CDX96421	Canola	vacuole	55.4	54.38
Bra016047.1-P	Field mustard	vacuole	55.4	54.38
KRH19305	Soybean	cytosol, extracellular, plastid	54.46	53.46
CDY27880	Canola	extracellular	52.58	52.83
CDY45077	Canola	extracellular	52.58	52.83
Bra020115.1-P	Field mustard	extracellular	52.58	52.83
VIT_07s0005g05920.t01	Wine grape	extracellular	50.7	51.67
CDY45079	Canola	extracellular, vacuole	52.58	51.14
Bra020114.1-P	Field mustard	extracellular, vacuole	52.58	51.14
VIT_07s0005g05930.t01	Wine grape	extracellular	49.77	50.72
VIT_07s0005g05910.t01	Wine grape	extracellular	49.77	50.72
VIT_12s0059g00740.t01	Wine grape	cytosol	29.11	50.41
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	50.7	43.55
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	42.72	42.13
TraesCS6A01G382000.1	Wheat	cytosol	23.94	41.8
TraesCS6A01G382900.1	Wheat	extracellular	41.78	41.2
TraesCS6A01G383000.1	Wheat	extracellular	40.85	40.28
TraesCS6A01G382200.1	Wheat	extracellular	40.85	40.28
TraesCS1A01G080000.1	Wheat	extracellular	41.31	39.29
TraesCS3A01G040900.1	Wheat	extracellular	39.44	37.33
TraesCS3A01G253300.1	Wheat	extracellular	37.56	36.04
TraesCS3A01G165500.1	Wheat	extracellular	37.09	35.91
TraesCS4A01G279300.1	Wheat	extracellular	37.56	35.87
TraesCS4A01G181900.1	Wheat	extracellular	37.56	35.87
TraesCS2A01G109200.1	Wheat	extracellular	36.62	35.29
TraesCS4A01G279100.1	Wheat	extracellular	36.62	35.14
TraesCS4A01G279200.1	Wheat	extracellular	36.62	34.82
TraesCS4A01G181700.1	Wheat	extracellular	36.62	34.82
TraesCS4A01G278900.1	Wheat	extracellular, unclear	37.09	34.8
TraesCS5A01G453200.1	Wheat	extracellular	37.56	34.78
TraesCS2A01G211800.1	Wheat	extracellular	36.15	33.92
CDX82141	Canola	vacuole	34.74	33.48
TraesCS4A01G181800.1	Wheat	extracellular	25.82	31.61
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	30.99	31.28
TraesCS4A01G181600.1	Wheat	mitochondrion	25.82	31.25
TraesCS6A01G028700.1	Wheat	extracellular, unclear	32.86	30.7

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF2	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2A01G075000	EnsemblPlants:TraesCS2A01G075000.1	SEG:seg

Description

No Description!

Coordinates

chr2A:-:33270378..33271019

Molecular Weight (calculated)

21988.6 Da

IEP (calculated)

6.069

GRAVY (calculated)

0.488

Length

213 amino acids

Sequence
(BLAST)

001: MANAMLLAAV LVYFLVLPFS ALALTQDFCV ADLACPDTPA GYPCKKGVGP GDFYYHGLAT AGNTNNLIKA AVTPAFVGQF PGVNGLGISA ARLDIAVGGV
101: VPLHTHPAAS ELLFVTEGTI LAGFISSSSN TVYTKTLYKG DIMVFPQGLL HYQYNGGSSP AVALVAFSGP NPGLQITDYA LFANNLPSAV VETVTFLDDA
201: QVKKLKSVLG GTG

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.