Factsheet for TraesCS4A01G181600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G033500.1	Wheat	cytosol	67.61	92.97
TraesCS4A01G279200.1	Wheat	extracellular	83.52	65.62
TraesCS4A01G279100.1	Wheat	extracellular	82.39	65.32
HORVU4Hr1G005380.1	Barley	extracellular	82.95	65.18
TraesCS4A01G181700.1	Wheat	extracellular	82.95	65.18
TraesCS4A01G279300.1	Wheat	extracellular	82.39	65.02
TraesCS4A01G181900.1	Wheat	extracellular	80.68	63.68
Os03t0694000-01	Rice	extracellular	73.86	56.77
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	72.73	56.39
Os03t0693800-00	Rice	extracellular	73.3	56.33
TraesCS4A01G278900.1	Wheat	extracellular, unclear	71.59	55.51
TraesCS4A01G181800.1	Wheat	extracellular	54.55	55.17
EER91050	Sorghum	extracellular	69.89	54.67
Os03t0693900-00	Rice	extracellular	70.45	54.63
TraesCS2A01G211800.1	Wheat	extracellular	69.89	54.19
Zm00001d033583_P001	Maize	extracellular	68.75	53.78
TraesCS6A01G382000.1	Wheat	cytosol	32.39	46.72
GSMUA_AchrUn_...	Banana	extracellular	33.52	36.88
GSMUA_Achr4P17250_001	Banana	extracellular	37.5	36.46
TraesCS6A01G383000.1	Wheat	extracellular	42.05	34.26
TraesCS3A01G040900.1	Wheat	extracellular	43.75	34.22
TraesCS5A01G453200.1	Wheat	extracellular	44.32	33.91
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	40.91	33.33
TraesCS6A01G382200.1	Wheat	extracellular	40.91	33.33
TraesCS6A01G382900.1	Wheat	extracellular	40.91	33.33
TraesCS3A01G165500.1	Wheat	extracellular	39.2	31.36
TraesCS1A01G080000.1	Wheat	extracellular	39.77	31.25
TraesCS2A01G109200.1	Wheat	extracellular	37.5	29.86
TraesCS3A01G253300.1	Wheat	extracellular	35.23	27.93
TraesCS6A01G028700.1	Wheat	extracellular, unclear	34.66	26.75
TraesCS7A01G178300.1	Wheat	extracellular	31.25	25.94
TraesCS2A01G075000.1	Wheat	extracellular	31.25	25.82
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	30.11	25.12

Protein Annotations

EnsemblPlants:TraesCS4A01G181600.1	EnsemblPlantsGene:TraesCS4A01G181600	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF26	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4A:-:456436432..456437241

Molecular Weight (calculated)

18986.3 Da

IEP (calculated)

10.352

GRAVY (calculated)

0.120

Length

176 amino acids

Sequence
(BLAST)

001: MQAHVGGRRR LPLLVQAGQG RQHVHPERLG LAELDVAEWP GTNTLGVSMN RVDFAPGGTN PPHIHPRATE IGIVMKGELL VGILGSLDSG NKLYFRVVRA
101: GETFLIPCGL MHFQFNVGKT EATMVVSFNS QNPSIVFVPL TLFGSNPPIP TPVLTRALRV EAGVVELLKS KFSAGF

Best Arabidopsis Sequence Match ( AT1G18970.1 )
(BLAST)

001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV

Arabidopsis Description

GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.