Factsheet for TraesCS3A01G040900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G477200.1	Wheat	extracellular	94.67	94.67
HORVU3Hr1G107830.1	Barley	extracellular	92.44	92.44
HORVU3Hr1G107860.1	Barley	extracellular	91.56	91.56
EES02060	Sorghum	extracellular	76.44	76.79
Zm00001d011853_P001	Maize	extracellular	74.22	73.89
Zm00001d042082_P001	Maize	extracellular	68.0	73.56
EES04228	Sorghum	extracellular	72.89	72.89
TraesCS6A01G382000.1	Wheat	cytosol	34.67	63.93
TraesCS3A01G165500.1	Wheat	extracellular	61.78	63.18
TraesCS6A01G383000.1	Wheat	extracellular	59.56	62.04
TraesCS6A01G382200.1	Wheat	extracellular	59.56	62.04
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	59.11	61.57
TraesCS6A01G382900.1	Wheat	extracellular	58.67	61.11
TraesCS1A01G080000.1	Wheat	extracellular	57.78	58.04
TraesCS4A01G181900.1	Wheat	extracellular	48.44	48.88
TraesCS4A01G279300.1	Wheat	extracellular	48.44	48.88
TraesCS4A01G181700.1	Wheat	extracellular	48.44	48.66
TraesCS4A01G279200.1	Wheat	extracellular	47.56	47.77
TraesCS4A01G279100.1	Wheat	extracellular	46.67	47.3
TraesCS4A01G278900.1	Wheat	extracellular, unclear	45.78	45.37
TraesCS2A01G211800.1	Wheat	extracellular	44.89	44.49
TraesCS5A01G453200.1	Wheat	extracellular	44.89	43.91
TraesCS4A01G181600.1	Wheat	mitochondrion	34.22	43.75
TraesCS3A01G253300.1	Wheat	extracellular	43.11	43.69
TraesCS4A01G181800.1	Wheat	extracellular	33.33	43.1
TraesCS2A01G109200.1	Wheat	extracellular	42.22	42.99
TraesCS7A01G178300.1	Wheat	extracellular	37.78	40.09
TraesCS2A01G075000.1	Wheat	extracellular	37.33	39.44
TraesCS6A01G028700.1	Wheat	extracellular, unclear	38.67	38.16
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	34.22	36.49

Protein Annotations

EnsemblPlants:TraesCS3A01G040900.1	EnsemblPlantsGene:TraesCS3A01G040900	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr3A:-:21359449..21360217

Molecular Weight (calculated)

23456.4 Da

IEP (calculated)

8.484

GRAVY (calculated)

0.220

Length

225 amino acids

Sequence
(BLAST)

001: MGPKQLPAVL LASCATLLAL ATPLLAGDPD TLQDFCVADY KSLKGPLRLN GFPCKRPENV TAGEFFSAAL AFPGNTCNPV GSAVTAANVE KLPGLNTLGV
101: SMSRVDYAPW GVNPPHTHPR ATEIIYVLEG SLDVGFVTTA GKLFARTVCK GELFVFPRGL VHYQKNNGGA PAAAISAFNS QLPGTQSLGL ALFAASPPVP
201: TDVLARALQV DGGLVEAIRS KFLPK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.