Factsheet for TraesCS6A01G382200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	97.69	97.69
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	84.72	97.34
HORVU6Hr1G089510.1	Barley	extracellular	94.44	94.44
TraesCS6B01G420700.1	Wheat	extracellular	93.06	93.06
TraesCSU01G088800.1	Wheat	cytosol	52.31	92.62
TraesCS6A01G382000.1	Wheat	cytosol	50.0	88.52
Os01t0284500-01	Rice	extracellular	88.43	88.43
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	88.43	88.43
TraesCS6A01G383000.1	Wheat	extracellular	87.04	87.04
TraesCS6A01G382900.1	Wheat	extracellular	85.65	85.65
Zm00001d008210_P002	Maize	extracellular	77.31	78.04
Zm00001d040519_P001	Maize	extracellular	78.7	77.98
EES02802	Sorghum	extracellular	78.24	77.17
TraesCS3A01G165500.1	Wheat	extracellular	65.28	64.09
TraesCS1A01G080000.1	Wheat	extracellular	65.74	63.39
TraesCS3A01G040900.1	Wheat	extracellular	62.04	59.56
TraesCS4A01G181900.1	Wheat	extracellular	49.07	47.53
TraesCS4A01G279300.1	Wheat	extracellular	49.07	47.53
TraesCS4A01G181700.1	Wheat	extracellular	48.61	46.88
TraesCS4A01G279200.1	Wheat	extracellular	48.61	46.88
TraesCS4A01G279100.1	Wheat	extracellular	47.69	46.4
TraesCS3A01G253300.1	Wheat	extracellular	45.83	44.59
TraesCS2A01G109200.1	Wheat	extracellular	45.37	44.34
TraesCS2A01G211800.1	Wheat	extracellular	45.83	43.61
TraesCS4A01G278900.1	Wheat	extracellular, unclear	45.37	43.17
TraesCS5A01G453200.1	Wheat	extracellular	45.83	43.04
TraesCS4A01G181800.1	Wheat	extracellular	33.8	41.95
TraesCS7A01G178300.1	Wheat	extracellular	40.74	41.51
TraesCS4A01G181600.1	Wheat	mitochondrion	33.33	40.91
TraesCS2A01G075000.1	Wheat	extracellular	40.28	40.85
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	37.5	38.39
TraesCS6A01G028700.1	Wheat	extracellular, unclear	39.35	37.28

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6A01G382200	EnsemblPlants:TraesCS6A01G382200.1	SEG:seg

Description

No Description!

Coordinates

chr6A:-:601263917..601264672

Molecular Weight (calculated)

22556.2 Da

IEP (calculated)

8.083

GRAVY (calculated)

0.229

Length

216 amino acids

Sequence
(BLAST)

001: MARLQLYAIA ACAVLLALAA ASLAGDPDML QDVCVADLKS SIKLNGFPCK ADITADDFFF PGLKKAGNTN NPAGSNVTAA NVQSFPGVNT LGVSMARIDY
101: APGGQNPPHT HPRATEIIFV LEGVLEVGFI TTANKLFTKT ITAGDVFVFP RGLVHFQQNR GHGPASVIAG FNSQLQGTQA IATTLFAAAP PVPSDVLAKA
201: FRVGTEDIDA VKAKFK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.