Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G421300.1 | Wheat | cytosol, extracellular, plastid | 92.62 | 60.11 |
| HORVU6Hr1G089510.1 | Barley | extracellular | 93.44 | 52.78 |
| TraesCS6D01G367000.1 | Wheat | extracellular, plasma membrane, vacuole | 93.44 | 52.78 |
| TraesCS6A01G382200.1 | Wheat | extracellular | 92.62 | 52.31 |
| TraesCS6B01G420700.1 | Wheat | extracellular | 90.98 | 51.39 |
| Os01t0284500-01 | Rice | extracellular | 86.89 | 49.07 |
| Zm00001d040519_P001 | Maize | extracellular | 81.15 | 45.41 |
| Zm00001d008210_P002 | Maize | extracellular | 76.23 | 43.46 |
| EES02802 | Sorghum | extracellular | 77.05 | 42.92 |
| TraesCSU01G057500.1 | Wheat | extracellular | 60.66 | 32.89 |
| TraesCSU01G057600.1 | Wheat | extracellular | 50.0 | 28.5 |
| TraesCSU01G172100.1 | Wheat | extracellular | 53.28 | 28.38 |
| TraesCSU01G137500.1 | Wheat | extracellular, plasma membrane, vacuole | 33.61 | 14.8 |
Protein Annotations
| EnsemblPlants:TraesCSU01G088800.1 | EnsemblPlantsGene:TraesCSU01G088800 | Gene3D:2.60.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Cupin_1 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll |
| InterPro:RmlC_Cupin_sf | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF36 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
| SMART:SM00835 | SUPFAM:SSF51182 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrUn:-:79449653..79450093
Molecular Weight (calculated)
13150.8 Da
IEP (calculated)
10.357
GRAVY (calculated)
0.037
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MARIDYAPGG QNPPHTHPRA TEIIFVTEGV LEVGFITTAN KLFTKTVTVG DVFVFPRGLV HFQQNRGRGP ASVIAGFNSQ LQGTQVITTT LFAAAPPVPS
101: DVLAKAFRVS NEDIDAVKAK FR
101: DVLAKAFRVS NEDIDAVKAK FR
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.