Factsheet for TraesCS6B01G421300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, extracellular, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G088800.1	Wheat	cytosol	60.11	92.62
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	98.4	85.65
TraesCS6A01G382200.1	Wheat	extracellular	97.34	84.72
TraesCS6B01G420700.1	Wheat	extracellular	96.81	84.26
HORVU6Hr1G089510.1	Barley	extracellular	95.21	82.87
Os01t0284500-01	Rice	extracellular	89.36	77.78
TraesCS6B01G422100.1	Wheat	extracellular	88.83	77.31
TraesCS6B01G421200.1	Wheat	extracellular	88.3	76.85
TraesCS6B01G422000.1	Wheat	extracellular	87.77	76.39
TraesCS6B01G420800.1	Wheat	extracellular	87.77	76.39
Zm00001d008210_P002	Maize	extracellular	78.72	69.16
Zm00001d040519_P001	Maize	extracellular	79.79	68.81
EES02802	Sorghum	extracellular	78.19	67.12
TraesCS3B01G200200.1	Wheat	extracellular	69.68	59.55
TraesCS1B01G098000.1	Wheat	extracellular	67.02	55.75
TraesCS3B01G544200.1	Wheat	extracellular	64.89	54.22
TraesCS3B01G543800.1	Wheat	extracellular	63.3	52.89
TraesCS3B01G543600.1	Wheat	extracellular	62.77	52.68
TraesCS3B01G543700.1	Wheat	extracellular	62.77	52.44
TraesCS4B01G033500.1	Wheat	cytosol	31.38	46.09
TraesCS3B01G544000.1	Wheat	extracellular	55.85	45.85
TraesCS4B01G033600.1	Wheat	extracellular, unclear	50.0	41.96
TraesCS4B01G033300.1	Wheat	extracellular	50.0	41.96
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	49.47	41.52
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	49.47	41.52
TraesCS3B01G282500.1	Wheat	extracellular	48.4	40.62
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	48.4	40.62
TraesCS4B01G033400.1	Wheat	extracellular	48.94	39.66
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	42.55	39.41
TraesCS3B01G285200.1	Wheat	extracellular	46.28	39.19
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	47.87	39.13
TraesCS2B01G616500.1	Wheat	extracellular	44.15	38.25
TraesCS7B01G084000.1	Wheat	plastid	42.55	37.74
TraesCS2B01G090300.1	Wheat	extracellular	42.55	37.74
TraesCS3B01G282300.1	Wheat	extracellular	40.43	37.07
TraesCS6B01G041100.1	Wheat	extracellular	40.96	33.77
TraesCS4B01G294100.1	Wheat	extracellular	39.36	33.18

Protein Annotations

EnsemblPlants:TraesCS6B01G421300.1	EnsemblPlantsGene:TraesCS6B01G421300	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6B:-:692094050..692094717

Molecular Weight (calculated)

19900.9 Da

IEP (calculated)

8.758

GRAVY (calculated)

0.102

Length

188 amino acids

Sequence
(BLAST)

001: MLQDVCVTDL KSSIKLNGFP CKADITADDF FFAGLKKPGN TNNPAGSNVT AANVQSFPGV NTLGVSMARI DYAPGGQNPP HTHPRATEII FVLEGVLEVG
101: FITTANKLFT KTITVGDVFV FPRGLVHFQQ NRGHVPASVI AGFNSQLQGT QAIATTLFAA APPVPSDVLA KAFRVGTEDI DAVKAKFK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.