Factsheet for TraesCS3B01G200200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19786127

msms PMID: 19786127 doi

FJ Kong, A Oyanagi, S Komatsu

National Institute of Crop Science, Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G176100.1	Wheat	extracellular	97.27	97.27
TraesCS3A01G165500.1	Wheat	extracellular	95.91	95.91
Os01t0249200-01	Rice	extracellular	82.73	80.18
EES02420	Sorghum	extracellular	80.0	77.88
GSMUA_Achr1P25160_001	Banana	extracellular	72.73	73.06
GSMUA_AchrUn_...	Banana	extracellular	72.27	72.94
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	70.45	71.76
GSMUA_Achr5P18440_001	Banana	extracellular	70.45	70.78
VIT_14s0060g00120.t01	Wine grape	extracellular	69.55	70.51
KRH68383	Soybean	nucleus	69.09	69.72
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	59.55	69.68
TraesCS1B01G098000.1	Wheat	extracellular	71.36	69.47
HORVU3Hr1G034100.2	Barley	cytosol, plastid	82.27	68.56
CDX76609	Canola	extracellular	68.18	68.18
KRG96655	Soybean	extracellular, vacuole	67.73	68.04
CDY11392	Canola	extracellular	67.73	67.73
Bra007652.1-P	Field mustard	extracellular	67.73	67.73
AT3G62020.1	Thale cress	extracellular, vacuole	67.27	67.27
KRH33715	Soybean	nucleus	68.18	67.26
TraesCS6B01G420700.1	Wheat	extracellular	65.91	67.13
KRH33687	Soybean	extracellular	67.27	66.97
KRG90420	Soybean	extracellular, nucleus	68.18	66.96
PGSC0003DMT400047065	Potato	cytosol, extracellular	63.64	66.67
GSMUA_Achr8P29820_001	Banana	extracellular	69.55	66.52
VIT_07s0005g02380.t01	Wine grape	extracellular	65.45	66.36
PGSC0003DMT400047067	Potato	cytosol	63.64	66.35
TraesCS3B01G543600.1	Wheat	extracellular	66.82	65.62
TraesCS3B01G544200.1	Wheat	extracellular	66.82	65.33
Bra031671.1-P	Field mustard	extracellular	64.09	65.28
CDY06361	Canola	extracellular	64.09	65.28
AT1G09560.1	Thale cress	extracellular	64.55	64.84
CDY22633	Canola	extracellular	63.64	64.81
KRH33688	Soybean	extracellular	64.55	64.55
TraesCS3B01G543800.1	Wheat	extracellular	65.91	64.44
TraesCS3B01G543700.1	Wheat	extracellular	65.91	64.44
KRG96631	Soybean	extracellular, vacuole	53.64	64.13
Solyc01g102390.2.1	Tomato	extracellular	64.09	64.09
AT1G02335.1	Thale cress	extracellular, vacuole	63.64	63.93
CDY31080	Canola	extracellular	63.64	63.93
TraesCS6B01G422100.1	Wheat	extracellular	62.73	63.89
TraesCS6B01G422000.1	Wheat	extracellular	62.73	63.89
Solyc01g102400.2.1	Tomato	extracellular	63.64	63.64
Solyc01g102380.2.1	Tomato	extracellular	64.55	63.39
CDY50897	Canola	extracellular	63.64	63.35
CDX93502	Canola	extracellular	64.09	63.23
CDY20692	Canola	extracellular	63.18	63.18
Bra030785.1-P	Field mustard	extracellular	63.18	63.18
Bra020014.1-P	Field mustard	extracellular	63.64	62.78
KRH69151	Soybean	cytosol	43.64	62.75
CDY15231	Canola	extracellular, vacuole	61.82	62.39
CDX89983	Canola	extracellular, vacuole	61.82	62.39
Bra033314.1-P	Field mustard	extracellular, vacuole	61.82	62.39
VIT_07s0005g02370.t01	Wine grape	extracellular	60.91	61.75
TraesCS6B01G421200.1	Wheat	extracellular	60.45	61.57
TraesCS6B01G420800.1	Wheat	extracellular	60.0	61.11
TraesCS3B01G544000.1	Wheat	extracellular	57.73	55.46
KXG32174	Sorghum	plastid	79.55	55.38
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	46.36	45.54
TraesCS3B01G282500.1	Wheat	extracellular	45.91	45.09
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	45.91	45.09
TraesCS4B01G033600.1	Wheat	extracellular, unclear	45.91	45.09
TraesCS4B01G033300.1	Wheat	extracellular	45.0	44.2
TraesCS4B01G033500.1	Wheat	cytosol	25.45	43.75
TraesCS3B01G285200.1	Wheat	extracellular	43.64	43.24
TraesCS4B01G033400.1	Wheat	extracellular	45.45	43.1
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	44.55	42.61
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	43.18	42.41
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	39.09	42.36
TraesCS3B01G282300.1	Wheat	extracellular	38.64	41.46
TraesCS6B01G041100.1	Wheat	extracellular	40.45	39.04
TraesCS2B01G090300.1	Wheat	extracellular	36.82	38.21
TraesCS7B01G084000.1	Wheat	plastid	36.36	37.74
TraesCS2B01G616500.1	Wheat	extracellular	35.91	36.41
TraesCS4B01G294100.1	Wheat	extracellular	36.82	36.32

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF22	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G200200	EnsemblPlants:TraesCS3B01G200200.1	SEG:seg

Description

No Description!

Coordinates

chr3B:-:228806991..228808236

Molecular Weight (calculated)

22920.7 Da

IEP (calculated)

7.507

GRAVY (calculated)

0.244

Length

220 amino acids

Sequence
(BLAST)

001: MMMARVSSAL FLAVAALALA VPALAGDPDY LQDICVADLK SDLKVNGFPC KANATADDFF TGVLAKPGAT NTTAGSVVTG ANVEKVPGLN TLGVSLSRID
101: YAPGGLNPPH THPRATEVVF VLYGELDVGF ITTANKLFAK TISQGDVFAF PRGLVHFQKN NADKPAAVIS AFNSQLPGTQ SIAMALFGAS PEVPDDVLAK
201: AFQIGTVEVD KIKAKFAPKK

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.