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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030785.1-P Field mustard extracellular 100.0 100.0
CDY31080 Canola extracellular 97.27 97.72
CDY50897 Canola extracellular 90.45 90.05
CDY06361 Canola extracellular 88.18 89.81
CDY22633 Canola extracellular 87.73 89.35
CDX93502 Canola extracellular 90.45 89.24
AT1G09560.1 Thale cress extracellular 85.0 85.39
GSMUA_Achr8P18750_001 Banana extracellular, vacuole 67.27 68.52
GSMUA_Achr5P18440_001 Banana extracellular 67.73 68.04
GSMUA_Achr1P25160_001 Banana extracellular 65.91 66.21
GSMUA_AchrUn_... Banana extracellular 64.55 65.14
PGSC0003DMT400047065 Potato cytosol, extracellular 60.91 63.81
TraesCS3A01G165500.1 Wheat extracellular 63.64 63.64
PGSC0003DMT400047067 Potato cytosol 60.91 63.51
TraesCS3B01G200200.1 Wheat extracellular 63.18 63.18
TraesCS3D01G176100.1 Wheat extracellular 62.73 62.73
CDX76609 Canola extracellular 62.73 62.73
Os05t0277500-01 Rice extracellular 62.73 62.44
CDY11392 Canola extracellular 61.82 61.82
TraesCS1A01G080000.1 Wheat extracellular 62.73 61.61
TraesCS1D01G081700.1 Wheat extracellular 62.73 61.61
TraesCS1B01G098000.1 Wheat extracellular 63.18 61.5
Solyc01g102390.2.1 Tomato extracellular 61.36 61.36
Solyc01g102400.2.1 Tomato extracellular 61.36 61.36
Os01t0249200-01 Rice extracellular 63.18 61.23
Solyc01g102380.2.1 Tomato extracellular 61.82 60.71
CDX89983 Canola extracellular, vacuole 60.0 60.55
CDY15231 Canola extracellular, vacuole 59.55 60.09
EES02420 Sorghum extracellular 61.36 59.73
GSMUA_Achr8P29820_001 Banana extracellular 62.27 59.57
CDX80572 Canola extracellular 55.91 56.42
EER95948 Sorghum extracellular 59.09 56.28
CDY19762 Canola extracellular 55.45 56.22
Zm00001d018954_P002 Maize extracellular 58.64 55.84
CDY05519 Canola extracellular 55.0 55.5
CDY18833 Canola extracellular 55.0 55.5
CDX87040 Canola extracellular 54.55 55.3
CDY05213 Canola extracellular 54.55 55.05
CDY61117 Canola extracellular 54.55 55.05
CDY05327 Canola vacuole 47.27 53.61
CDX74123 Canola extracellular 51.36 51.83
CDY47579 Canola extracellular 44.55 51.58
CDY49987 Canola extracellular 50.91 51.38
CDX81907 Canola extracellular 47.73 49.07
CDY19265 Canola extracellular 47.73 49.07
CDY21688 Canola extracellular 47.73 49.07
HORVU3Hr1G034100.2 Barley cytosol, plastid 58.18 48.48
CDY26706 Canola extracellular 46.82 48.13
KXG32174 Sorghum plastid 61.82 43.04
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 62.73 41.19
CDY51841 Canola extracellular, plasma membrane, vacuole 38.18 39.81
CDX70935 Canola extracellular, vacuole 37.27 38.86
CDY45077 Canola extracellular 37.27 38.68
CDY27880 Canola extracellular 37.27 38.68
CDY11164 Canola extracellular, vacuole 36.36 38.65
CDX68260 Canola extracellular, vacuole 36.36 38.65
CDY16549 Canola extracellular 36.82 38.39
CDY45080 Canola extracellular, plasma membrane, vacuole 36.82 38.39
CDX92448 Canola extracellular 36.82 38.39
CDY22866 Canola extracellular 36.82 38.39
CDX85429 Canola extracellular 36.82 38.39
CDX96421 Canola vacuole 37.27 37.79
CDX72929 Canola vacuole 35.45 35.94
CDY45079 Canola extracellular, vacuole 35.45 35.62
CDX68163 Canola extracellular 34.55 34.7
CDY34891 Canola vacuole 29.55 34.21
CDY22215 Canola extracellular 35.0 34.07
CDY41321 Canola extracellular 35.0 34.07
CDY07800 Canola vacuole 28.64 32.98
CDX85858 Canola extracellular 33.64 32.31
CDX82141 Canola vacuole 25.91 25.79
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078G6T6UniProt:A0A078G6T6EnsemblPlants:CDY20692ProteinID:CDY20692
ProteinID:CDY20692.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00012882001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF39
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI00025467C3:::::
Description
BnaC08g13660DBnaC08g13660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6T6]
Coordinates
chrLK032110:-:672811..673806
Molecular Weight (calculated)
23308.2 Da
IEP (calculated)
8.892
GRAVY (calculated)
0.220
Length
220 amino acids
Sequence
(BLAST)
001: MASPTSFLSI FLCLVAFLFI TVSADPDMLQ DLCVADLSSG IKVNGFPCKD AANVSSLDFF SQGIANPGLT NNTFGALVTG ANVMTIPGLN TLGVSLARID
101: YAPGGLNPPH THPRATEVVY VLEGTLDVGF LTTANRLISQ SLKKGDVFAF PRGLVHFQKN NGRVPAAVIA AFNSQLPGTQ SLGATLFGST PPVPDEILSQ
201: AFQTTPRIVR NIKSRFQPKK
Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)
001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
Arabidopsis Description
GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.