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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020798.1-P Field mustard extracellular 95.87 96.31
CDY49987 Canola extracellular 86.24 86.24
CDX74123 Canola extracellular 86.24 86.24
CDY18833 Canola extracellular 81.19 81.19
AT3G05930.1 Thale cress extracellular 80.28 79.91
CDY47579 Canola extracellular 67.43 77.37
CDY61117 Canola extracellular 63.3 63.3
CDX80572 Canola extracellular 62.84 62.84
CDY05519 Canola extracellular 62.84 62.84
CDX87040 Canola extracellular 61.01 61.29
CDY19762 Canola extracellular 61.01 61.29
CDY05327 Canola vacuole 54.13 60.82
CDY06361 Canola extracellular 55.96 56.48
CDY22633 Canola extracellular 55.05 55.56
CDY31080 Canola extracellular 55.5 55.25
CDX76609 Canola extracellular 55.5 55.0
CDY20692 Canola extracellular 55.05 54.55
CDY11392 Canola extracellular 55.05 54.55
CDY50897 Canola extracellular 55.05 54.3
CDX93502 Canola extracellular 55.5 54.26
CDX89983 Canola extracellular, vacuole 52.29 52.29
CDY15231 Canola extracellular, vacuole 51.83 51.83
CDY19265 Canola extracellular 43.12 43.93
CDX81907 Canola extracellular 42.66 43.46
CDY26706 Canola extracellular 42.66 43.46
CDY21688 Canola extracellular 42.2 42.99
CDX68163 Canola extracellular 38.99 38.81
CDX85858 Canola extracellular 37.61 35.81
CDY27880 Canola extracellular 34.4 35.38
CDY45077 Canola extracellular 34.4 35.38
CDY51841 Canola extracellular, plasma membrane, vacuole 33.95 35.07
CDY45080 Canola extracellular, plasma membrane, vacuole 33.95 35.07
CDX85429 Canola extracellular 33.03 34.12
CDY22866 Canola extracellular 33.03 34.12
CDX92448 Canola extracellular 33.03 34.12
CDX70935 Canola extracellular, vacuole 33.03 34.12
CDY16549 Canola extracellular 33.03 34.12
CDY11164 Canola extracellular, vacuole 32.11 33.82
CDX96421 Canola vacuole 33.49 33.64
CDX68260 Canola extracellular, vacuole 31.65 33.33
CDX72929 Canola vacuole 33.03 33.18
CDY34891 Canola vacuole 28.9 33.16
CDY45079 Canola extracellular, vacuole 33.03 32.88
CDY07800 Canola vacuole 27.98 31.94
CDY41321 Canola extracellular 32.57 31.42
CDY22215 Canola extracellular 32.57 31.42
CDX82141 Canola vacuole 23.85 23.53
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078EZY3EnsemblPlants:CDY05213ProteinID:CDY05213ProteinID:CDY05213.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0030145GO:GO:0045735EnsemblPlantsGene:GSBRNA2T00120022001
InterPro:GerminInterPro:IPR014710PFAM:PF00190PRINTS:PR00325PANTHER:PTHR31238PANTHER:PTHR31238:SF18
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EC18AE
Description
BnaC05g45900D
Coordinates
chrLK031960:+:389333..390261
Molecular Weight (calculated)
23151.9 Da
IEP (calculated)
7.667
GRAVY (calculated)
-0.041
Length
218 amino acids
Sequence
(BLAST)
001: MAISMTHLFV TIMLLAAHTA LAETNMLQDL CVADLKGSKV NGYPCKDPSQ VTPEDFYYMG LANAADTSNT SMGSAVTAGN VEKIPGLNMM GTSMSRIDYA
101: PGGLNPPHLH PRASEAIFVL EGSLFVGFLT TSGKLISKHV NKGDVFAFPR ALLHFQQNPN KTPASVIAAF DSQNPGTQSV GPSLFGANPP IPDDLLAKAF
201: SLGTNDIQNI KGKFQPKK
Best Arabidopsis Sequence Match ( AT3G05930.1 )
(BLAST)
001: MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK
Arabidopsis Description
GLP8Germin-like protein subfamily 2 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P93000]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.