Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05519 | Canola | extracellular | 90.21 | 80.28 |
| CDY61117 | Canola | extracellular | 86.6 | 77.06 |
| CDX80572 | Canola | extracellular | 83.51 | 74.31 |
| CDY19762 | Canola | extracellular | 82.99 | 74.19 |
| CDX87040 | Canola | extracellular | 82.47 | 73.73 |
| AT5G26700.1 | Thale cress | extracellular, vacuole | 77.32 | 70.42 |
| CDY05213 | Canola | extracellular | 60.82 | 54.13 |
| CDY49987 | Canola | extracellular | 58.25 | 51.83 |
| CDY18833 | Canola | extracellular | 58.25 | 51.83 |
| CDX74123 | Canola | extracellular | 57.22 | 50.92 |
| CDY06361 | Canola | extracellular | 56.19 | 50.46 |
| CDY22633 | Canola | extracellular | 55.15 | 49.54 |
| CDY50897 | Canola | extracellular | 54.64 | 47.96 |
| CDY31080 | Canola | extracellular | 54.12 | 47.95 |
| CDX93502 | Canola | extracellular | 54.64 | 47.53 |
| CDY20692 | Canola | extracellular | 53.61 | 47.27 |
| CDY47579 | Canola | extracellular | 45.88 | 46.84 |
| CDX76609 | Canola | extracellular | 53.09 | 46.82 |
| CDX89983 | Canola | extracellular, vacuole | 52.06 | 46.33 |
| CDY11392 | Canola | extracellular | 52.06 | 45.91 |
| CDY15231 | Canola | extracellular, vacuole | 51.55 | 45.87 |
| CDX81907 | Canola | extracellular | 40.21 | 36.45 |
| CDY26706 | Canola | extracellular | 40.21 | 36.45 |
| CDY21688 | Canola | extracellular | 40.21 | 36.45 |
| CDY19265 | Canola | extracellular | 39.69 | 35.98 |
| CDY45080 | Canola | extracellular, plasma membrane, vacuole | 37.11 | 34.12 |
| CDY51841 | Canola | extracellular, plasma membrane, vacuole | 37.11 | 34.12 |
| CDY22866 | Canola | extracellular | 36.6 | 33.65 |
| CDX70935 | Canola | extracellular, vacuole | 36.6 | 33.65 |
| CDX85429 | Canola | extracellular | 36.6 | 33.65 |
| CDX92448 | Canola | extracellular | 36.6 | 33.65 |
| CDY16549 | Canola | extracellular | 36.6 | 33.65 |
| CDX68260 | Canola | extracellular, vacuole | 35.57 | 33.33 |
| CDY11164 | Canola | extracellular, vacuole | 35.57 | 33.33 |
| CDY22215 | Canola | extracellular | 38.14 | 32.74 |
| CDY41321 | Canola | extracellular | 38.14 | 32.74 |
| CDY27880 | Canola | extracellular | 35.05 | 32.08 |
| CDY45077 | Canola | extracellular | 35.05 | 32.08 |
| CDY45079 | Canola | extracellular, vacuole | 34.54 | 30.59 |
| CDX96421 | Canola | vacuole | 34.02 | 30.41 |
| CDX72929 | Canola | vacuole | 33.51 | 29.95 |
| CDY34891 | Canola | vacuole | 28.35 | 28.95 |
| CDX68163 | Canola | extracellular | 31.96 | 28.31 |
| CDY07800 | Canola | vacuole | 26.8 | 27.23 |
| CDX85858 | Canola | extracellular | 30.41 | 25.76 |
| CDX82141 | Canola | vacuole | 21.65 | 19.0 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | GO:A0A078EWG6 | EnsemblPlants:CDY05327 | ProteinID:CDY05327 | ProteinID:CDY05327.1 |
| InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 | GO:GO:0045735 | EnsemblPlantsGene:GSBRNA2T00120169001 |
| InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
| PANTHER:PTHR31238 | PANTHER:PTHR31238:SF18 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 |
| SignalP:SignalP-noTM | UniParc:UPI0004EE96B8 | SEG:seg | : | : | : |
Description
BnaC02g40350D
Coordinates
chrLK031961:-:189315..190135
Molecular Weight (calculated)
20926.7 Da
IEP (calculated)
10.310
GRAVY (calculated)
0.170
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVTTHLLV VIFVLLICPM RSKSTDTQVT PEDFYFQGLA TASAASNTST GAIVTGATVE KLPGLNTLGL SMSRIDYAPN GLNPPHIHPR ASEIIYVLEG
101: QLYVGFVTIA GKLVAKHINK GEVFVFPKGL LHFQKNIAKS APASVIAAFD SQLPGTQSLV SSLFGALPED ILVKSFQFKP KQVKKIKSRY QPKK
101: QLYVGFVTIA GKLVAKHINK GEVFVFPKGL LHFQKNIAKS APASVIAAFD SQLPGTQSLV SSLFGALPED ILVKSFQFKP KQVKKIKSRY QPKK
001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
Arabidopsis Description
GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.