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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68260 Canola extracellular, vacuole 96.14 96.14
AT1G72610.1 Thale cress extracellular, vacuole 90.82 90.38
CDX72929 Canola vacuole 91.79 87.56
CDX96421 Canola vacuole 91.3 87.1
KRH06186 Soybean extracellular, vacuole 68.12 67.46
KRH47600 Soybean extracellular 67.63 66.99
CDY51841 Canola extracellular, plasma membrane, vacuole 65.7 64.45
CDX70935 Canola extracellular, vacuole 65.22 63.98
CDY16549 Canola extracellular 64.73 63.51
CDY45080 Canola extracellular, plasma membrane, vacuole 64.73 63.51
CDX85429 Canola extracellular 64.73 63.51
CDY22866 Canola extracellular 64.73 63.51
CDX92448 Canola extracellular 64.73 63.51
Os08t0460000-01 Rice extracellular 60.39 58.69
TraesCS2D01G073700.1 Wheat extracellular 59.9 58.49
HORVU7Hr1G036720.1 Barley extracellular 59.9 58.49
TraesCS7B01G084000.1 Wheat plastid 59.42 58.02
TraesCS2B01G090300.1 Wheat extracellular 59.42 58.02
TraesCS7A01G178300.1 Wheat extracellular 59.42 58.02
TraesCS2A01G075000.1 Wheat extracellular 59.42 57.75
TraesCS7D01G180200.1 Wheat extracellular, vacuole 58.94 57.55
TraesCS2D01G073600.1 Wheat extracellular 56.52 56.25
Zm00001d037513_P001 Maize plastid 57.0 55.66
CDY45079 Canola extracellular, vacuole 56.52 53.42
EES17780 Sorghum extracellular, vacuole 57.0 53.39
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 64.73 52.34
GSMUA_Achr2P18710_001 Banana extracellular 62.32 51.6
CDY45077 Canola extracellular 52.66 51.42
CDY27880 Canola extracellular 52.66 51.42
CDX82141 Canola vacuole 54.59 51.13
CDY21688 Canola extracellular 39.61 38.32
CDX81907 Canola extracellular 39.13 37.85
CDY19265 Canola extracellular 38.65 37.38
CDY26706 Canola extracellular 38.16 36.92
CDY20692 Canola extracellular 38.65 36.36
CDX89983 Canola extracellular, vacuole 38.16 36.24
CDY22633 Canola extracellular 37.68 36.11
CDY31080 Canola extracellular 38.16 36.07
CDX87040 Canola extracellular 37.68 35.94
CDY15231 Canola extracellular, vacuole 37.68 35.78
CDY06361 Canola extracellular 37.2 35.65
CDY05327 Canola vacuole 33.33 35.57
CDY19762 Canola extracellular 37.2 35.48
CDY05519 Canola extracellular 37.2 35.32
CDX93502 Canola extracellular 37.68 34.98
CDY61117 Canola extracellular 36.72 34.86
CDY50897 Canola extracellular 37.2 34.84
CDX80572 Canola extracellular 36.23 34.4
CDY18833 Canola extracellular 36.23 34.4
CDX76609 Canola extracellular 35.75 33.64
CDY11392 Canola extracellular 35.75 33.64
CDY05213 Canola extracellular 33.82 32.11
CDX74123 Canola extracellular 33.82 32.11
CDY47579 Canola extracellular 28.99 31.58
CDY22215 Canola extracellular 34.3 31.42
CDY41321 Canola extracellular 34.3 31.42
CDY34891 Canola vacuole 28.5 31.05
CDY49987 Canola extracellular 32.37 30.73
CDY07800 Canola vacuole 28.02 30.37
CDX68163 Canola extracellular 31.88 30.14
CDX85858 Canola extracellular 30.92 27.95
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078FE00UniProt:A0A078FE00EnsemblPlants:CDY11164ProteinID:CDY11164
ProteinID:CDY11164.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00049176001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF92
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EC513C
SEG:seg:::::
Description
BnaC06g24160DBnaC06g24160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FE00]
Coordinates
chrLK032009:+:887400..888333
Molecular Weight (calculated)
21623.5 Da
IEP (calculated)
9.594
GRAVY (calculated)
0.545
Length
207 amino acids
Sequence
(BLAST)
001: MLRIIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKVKDFV FSLGTPGNTT NIISAAVTPG FSAQFPGLNG LGLSTARLDL APKGVIPMHT
101: HPGASEVLFV LDGYITAGFV SSANSVYVQT LKPGQVMVFP QGLLHFQINA GKSAAAAFVT FSSASPGLQI LDFALFANSL PTELVSATTF LDPALVKKLK
201: GVLGGTG
Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Arabidopsis Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.