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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016047.1-P Field mustard vacuole 100.0 100.0
CDX72929 Canola vacuole 94.47 94.47
CDY11164 Canola extracellular, vacuole 87.1 91.3
CDX68260 Canola extracellular, vacuole 85.71 89.86
AT1G72610.1 Thale cress extracellular, vacuole 82.49 86.06
KRH06186 Soybean extracellular, vacuole 62.67 65.07
KRH47600 Soybean extracellular 61.75 64.11
CDY51841 Canola extracellular, plasma membrane, vacuole 60.83 62.56
CDY16549 Canola extracellular 59.91 61.61
CDY22866 Canola extracellular 59.91 61.61
CDY45080 Canola extracellular, plasma membrane, vacuole 59.91 61.61
CDX92448 Canola extracellular 59.91 61.61
CDX85429 Canola extracellular 59.91 61.61
CDX70935 Canola extracellular, vacuole 59.91 61.61
TraesCS2B01G090300.1 Wheat extracellular 54.84 56.13
TraesCS2D01G073700.1 Wheat extracellular 54.84 56.13
Os08t0460000-01 Rice extracellular 54.84 55.87
HORVU7Hr1G036720.1 Barley extracellular 54.38 55.66
TraesCS7D01G180200.1 Wheat extracellular, vacuole 54.38 55.66
TraesCS2A01G075000.1 Wheat extracellular 54.38 55.4
TraesCS7A01G178300.1 Wheat extracellular 53.92 55.19
TraesCS7B01G084000.1 Wheat plastid 53.92 55.19
TraesCS2D01G073600.1 Wheat extracellular 52.07 54.33
Zm00001d037513_P001 Maize plastid 52.07 53.3
CDY45079 Canola extracellular, vacuole 53.0 52.51
EES17780 Sorghum extracellular, vacuole 53.0 52.04
CDY45077 Canola extracellular 49.77 50.94
CDY27880 Canola extracellular 49.77 50.94
CDX82141 Canola vacuole 51.61 50.68
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 58.99 50.0
GSMUA_Achr2P18710_001 Banana extracellular 56.22 48.8
CDY21688 Canola extracellular 38.25 38.78
CDY19265 Canola extracellular 38.25 38.78
CDX81907 Canola extracellular 38.25 38.78
CDY26706 Canola extracellular 37.33 37.85
CDY22633 Canola extracellular 37.33 37.5
CDY20692 Canola extracellular 37.79 37.27
CDX89983 Canola extracellular, vacuole 37.33 37.16
CDY06361 Canola extracellular 36.87 37.04
CDY31080 Canola extracellular 37.33 36.99
CDY15231 Canola extracellular, vacuole 36.87 36.7
CDX93502 Canola extracellular 37.33 36.32
CDY50897 Canola extracellular 36.87 36.2
CDX87040 Canola extracellular 35.48 35.48
CDY19762 Canola extracellular 35.02 35.02
CDY11392 Canola extracellular 35.48 35.0
CDX76609 Canola extracellular 35.48 35.0
CDY18833 Canola extracellular 35.02 34.86
CDY05327 Canola vacuole 30.41 34.02
CDY05519 Canola extracellular 34.1 33.95
CDY61117 Canola extracellular 34.1 33.95
CDY05213 Canola extracellular 33.64 33.49
CDX80572 Canola extracellular 33.64 33.49
CDX74123 Canola extracellular 32.26 32.11
CDY47579 Canola extracellular 27.65 31.58
CDY49987 Canola extracellular 30.88 30.73
CDX68163 Canola extracellular 30.88 30.59
CDY41321 Canola extracellular 31.8 30.53
CDY22215 Canola extracellular 31.8 30.53
CDX85858 Canola extracellular 29.95 28.38
CDY34891 Canola vacuole 24.42 27.89
CDY07800 Canola vacuole 23.5 26.7
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078E522EnsemblPlants:CDX96421ProteinID:CDX96421ProteinID:CDX96421.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0030145
GO:GO:0045735GO:GO:0046872GO:GO:0048046EnsemblPlantsGene:GSBRNA2T00102586001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF92
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0002541C42
SEG:seg:::::
Description
BnaA07g30320D
Coordinates
chrLK031894:-:769515..770771
Molecular Weight (calculated)
22826.9 Da
IEP (calculated)
10.370
GRAVY (calculated)
0.457
Length
217 amino acids
Sequence
(BLAST)
001: MLRIIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKASDFV FSLGTPGNTT NIISAAVTPG FVAQFPALNG LGISTARLDL APKGVIPMHT
101: HPGASEVLFV LDGSITAGFI SSANSVYVQT LKPGQVMVFP QGLLHFQINA GKTPAAAFVT FSSASPGLQI LDFALFANTL STELVSATTF LPPATVKTLK
201: GSHRFISLAK TKSKHSP
Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Arabidopsis Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.