Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74123 | Canola | extracellular | 97.71 | 97.71 |
| CDY05213 | Canola | extracellular | 86.24 | 86.24 |
| CDY18833 | Canola | extracellular | 84.86 | 84.86 |
| CDY47579 | Canola | extracellular | 69.72 | 80.0 |
| AT3G05930.1 | Thale cress | extracellular | 80.28 | 79.91 |
| CDY61117 | Canola | extracellular | 61.01 | 61.01 |
| CDX80572 | Canola | extracellular | 61.01 | 61.01 |
| CDY05519 | Canola | extracellular | 60.09 | 60.09 |
| CDX87040 | Canola | extracellular | 59.17 | 59.45 |
| CDY19762 | Canola | extracellular | 58.72 | 58.99 |
| CDY05327 | Canola | vacuole | 51.83 | 58.25 |
| CDX76609 | Canola | extracellular | 53.67 | 53.18 |
| CDY06361 | Canola | extracellular | 52.29 | 52.78 |
| CDY11392 | Canola | extracellular | 53.21 | 52.73 |
| CDY31080 | Canola | extracellular | 52.29 | 52.05 |
| CDY50897 | Canola | extracellular | 52.75 | 52.04 |
| CDY22633 | Canola | extracellular | 51.38 | 51.85 |
| CDX89983 | Canola | extracellular, vacuole | 51.83 | 51.83 |
| CDY15231 | Canola | extracellular, vacuole | 51.83 | 51.83 |
| CDX93502 | Canola | extracellular | 52.29 | 51.12 |
| CDY20692 | Canola | extracellular | 51.38 | 50.91 |
| CDY19265 | Canola | extracellular | 41.74 | 42.52 |
| CDY26706 | Canola | extracellular | 41.28 | 42.06 |
| CDY21688 | Canola | extracellular | 39.45 | 40.19 |
| CDX81907 | Canola | extracellular | 39.45 | 40.19 |
| CDX68163 | Canola | extracellular | 37.61 | 37.44 |
| CDX85858 | Canola | extracellular | 36.7 | 34.93 |
| CDY27880 | Canola | extracellular | 33.95 | 34.91 |
| CDY45077 | Canola | extracellular | 33.95 | 34.91 |
| CDY51841 | Canola | extracellular, plasma membrane, vacuole | 33.03 | 34.12 |
| CDY45080 | Canola | extracellular, plasma membrane, vacuole | 33.03 | 34.12 |
| CDX92448 | Canola | extracellular | 32.11 | 33.18 |
| CDY16549 | Canola | extracellular | 32.11 | 33.18 |
| CDX70935 | Canola | extracellular, vacuole | 32.11 | 33.18 |
| CDX85429 | Canola | extracellular | 32.11 | 33.18 |
| CDY22866 | Canola | extracellular | 32.11 | 33.18 |
| CDY11164 | Canola | extracellular, vacuole | 30.73 | 32.37 |
| CDY45079 | Canola | extracellular, vacuole | 32.11 | 31.96 |
| CDX68260 | Canola | extracellular, vacuole | 30.28 | 31.88 |
| CDX72929 | Canola | vacuole | 31.19 | 31.34 |
| CDY34891 | Canola | vacuole | 27.06 | 31.05 |
| CDY41321 | Canola | extracellular | 32.11 | 30.97 |
| CDY22215 | Canola | extracellular | 32.11 | 30.97 |
| CDX96421 | Canola | vacuole | 30.73 | 30.88 |
| CDY07800 | Canola | vacuole | 26.15 | 29.84 |
| CDX82141 | Canola | vacuole | 22.48 | 22.17 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | GO:A0A078IJ86 | UniProt:A0A078IJ86 | EnsemblPlants:CDY49987 | ProteinID:CDY49987 |
| ProteinID:CDY49987.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00094188001 | InterPro:Germin | InterPro:IPR014710 |
| PFAM:PF00190 | PRINTS:PR00325 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF18 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI0004EB6288 | : | : |
Description
BnaC03g34440DBnaC03g34440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJ86]
Coordinates
chrLK032873:+:43939..45132
Molecular Weight (calculated)
23201.0 Da
IEP (calculated)
7.668
GRAVY (calculated)
0.074
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSMIHLFV TVFLVAAHTA FAETNMLQDL CVADLKGAKV NGYACKDPSQ ITPEDFYYIG LAAAADTSNT AMGSAITAGN VEKIPGLNMM GTSMSRIDYA
101: PGGLNPPHLH PRASEAIFVL EGRLFVGFLT TTGKLISKHI NKGDVFVFPR ALLHFQQNPN NAPASVIAAF DSQNPGTQSV GPSLFGANPP IPDDLLAKAF
201: GVEPQVIQKV KEKFPAKK
101: PGGLNPPHLH PRASEAIFVL EGRLFVGFLT TTGKLISKHI NKGDVFVFPR ALLHFQQNPN NAPASVIAAF DSQNPGTQSV GPSLFGANPP IPDDLLAKAF
201: GVEPQVIQKV KEKFPAKK
001: MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK
Arabidopsis Description
GLP8Germin-like protein subfamily 2 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P93000]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.