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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:cytosol, nucleus, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11164 Canola extracellular, vacuole 51.13 54.59
CDX68260 Canola extracellular, vacuole 49.32 52.66
AT1G72610.1 Thale cress extracellular, vacuole 48.87 51.92
CDX96421 Canola vacuole 50.68 51.61
CDX72929 Canola vacuole 50.23 51.15
KRH47600 Soybean extracellular 38.46 40.67
KRH06186 Soybean extracellular, vacuole 38.46 40.67
CDY51841 Canola extracellular, plasma membrane, vacuole 34.84 36.49
HORVU7Hr1G036720.1 Barley extracellular 34.84 36.32
CDX85429 Canola extracellular 34.39 36.02
CDY16549 Canola extracellular 34.39 36.02
CDX92448 Canola extracellular 34.39 36.02
CDY22866 Canola extracellular 34.39 36.02
CDY45080 Canola extracellular, plasma membrane, vacuole 34.39 36.02
CDX70935 Canola extracellular, vacuole 34.39 36.02
TraesCS7A01G178300.1 Wheat extracellular 34.39 35.85
TraesCS2B01G090300.1 Wheat extracellular 34.39 35.85
TraesCS7B01G084000.1 Wheat plastid 34.39 35.85
TraesCS7D01G180200.1 Wheat extracellular, vacuole 34.39 35.85
TraesCS2D01G073700.1 Wheat extracellular 33.94 35.38
Os08t0460000-01 Rice extracellular 33.94 35.21
TraesCS2A01G075000.1 Wheat extracellular 33.48 34.74
Zm00001d037513_P001 Maize plastid 32.58 33.96
CDY27880 Canola extracellular 32.13 33.49
CDY45077 Canola extracellular 32.13 33.49
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 38.46 33.2
CDY45079 Canola extracellular, vacuole 32.58 32.88
TraesCS2D01G073600.1 Wheat extracellular 30.77 32.69
EES17780 Sorghum extracellular, vacuole 32.58 32.58
GSMUA_Achr2P18710_001 Banana extracellular 34.84 30.8
CDY21688 Canola extracellular 27.15 28.04
CDX81907 Canola extracellular 26.7 27.57
CDY19265 Canola extracellular 25.79 26.64
CDY26706 Canola extracellular 25.79 26.64
CDY47579 Canola extracellular 22.62 26.32
CDY20692 Canola extracellular 25.79 25.91
CDY18833 Canola extracellular 25.34 25.69
CDY31080 Canola extracellular 25.34 25.57
CDX87040 Canola extracellular 24.89 25.35
CDY19762 Canola extracellular 24.89 25.35
CDY06361 Canola extracellular 24.43 25.0
CDY22633 Canola extracellular 24.43 25.0
CDX89983 Canola extracellular, vacuole 24.43 24.77
CDX93502 Canola extracellular 24.89 24.66
CDX76609 Canola extracellular 24.43 24.55
CDY50897 Canola extracellular 24.43 24.43
CDY61117 Canola extracellular 23.98 24.31
CDY15231 Canola extracellular, vacuole 23.98 24.31
CDX80572 Canola extracellular 23.98 24.31
CDY05519 Canola extracellular 23.98 24.31
CDY11392 Canola extracellular 23.98 24.09
CDY05213 Canola extracellular 23.53 23.85
CDX74123 Canola extracellular 23.08 23.39
CDY49987 Canola extracellular 22.17 22.48
CDX68163 Canola extracellular 22.17 22.37
CDY34891 Canola vacuole 19.0 22.11
CDY07800 Canola vacuole 19.0 21.99
CDY05327 Canola vacuole 19.0 21.65
CDX85858 Canola extracellular 22.17 21.4
CDY41321 Canola extracellular 20.36 19.91
CDY22215 Canola extracellular 20.36 19.91
Protein Annotations
EnsemblPlants:CDX82141EnsemblPlantsGene:GSBRNA2T00137192001Gene3D:2.60.120.10GO:A0A078CY95GO:GO:0003674GO:GO:0005488
GO:GO:0030145GO:GO:0045735InterPro:Cupin_1InterPro:Germin_Mn-BSInterPro:IPR014710InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sfPANTHER:PTHR31238PANTHER:PTHR31238:SF92PFAM:PF00190ProteinID:CDX82141ProteinID:CDX82141.1
ScanProsite:PS00725SEG:segSUPFAM:SSF51182UniParc:UPI0004EF3A1AMapMan:35.1:
Description
BnaC02g21490D
Coordinates
chrLK031827:+:1052356..1054238
Molecular Weight (calculated)
23647.2 Da
IEP (calculated)
4.731
GRAVY (calculated)
0.017
Length
221 amino acids
Sequence
(BLAST)
001: MIELLSFKKQ IKTPPELESS LLELESSSPE LESSSPELES SSPEFLITEK NRAKSKELVL TPTNQNVVRI IFLISLLFAL STASVQDFCV ADLKRAETPA
101: GYPCICPIHV KAKDFVFSGL GTPGNTNNII SAAVTPGFVA QFPGLNGLGL STARLDLAPK GVIPMHTHPG ASEVLFVLDD TKTGTGHGFP SGLASFPDQC
201: GEISCCSLCD FQQRQSWSSD S
Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Arabidopsis Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.