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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002316.1-P Field mustard extracellular 100.0 100.0
CDY22866 Canola extracellular 100.0 100.0
CDY16549 Canola extracellular 100.0 100.0
CDX92448 Canola extracellular 100.0 100.0
CDY45080 Canola extracellular, plasma membrane, vacuole 95.73 95.73
CDY51841 Canola extracellular, plasma membrane, vacuole 93.84 93.84
AT5G20630.1 Thale cress extracellular, plasma membrane, vacuole 92.42 92.42
CDX70935 Canola extracellular, vacuole 92.42 92.42
CDY27880 Canola extracellular 77.73 77.36
CDY45077 Canola extracellular 77.73 77.36
CDY45079 Canola extracellular, vacuole 78.2 75.34
KRH02617 Soybean nucleus 69.67 70.67
VIT_18s0086g00590.t01 Wine grape cytosol 38.86 66.67
KRH12528 Soybean extracellular 67.3 66.67
CDX68260 Canola extracellular, vacuole 64.45 65.7
Solyc03g123410.1.1 Tomato nucleus 63.98 64.9
PGSC0003DMT400036428 Potato extracellular 63.98 64.9
CDY11164 Canola extracellular, vacuole 63.51 64.73
PGSC0003DMT400030317 Potato extracellular 63.51 64.42
VIT_09s0002g01330.t01 Wine grape cytosol, extracellular, nucleus 28.44 60.61
CDX96421 Canola vacuole 61.61 59.91
VIT_09s0002g01320.t01 Wine grape extracellular 58.77 59.33
CDX72929 Canola vacuole 60.66 58.99
TraesCS2D01G073700.1 Wheat extracellular 59.24 58.96
TraesCS2B01G090300.1 Wheat extracellular 59.24 58.96
VIT_18s0086g00410.t01 Wine grape extracellular 58.29 58.85
TraesCS7D01G180200.1 Wheat extracellular, vacuole 58.77 58.49
Os08t0460000-01 Rice extracellular 58.77 58.22
TraesCS2A01G075000.1 Wheat extracellular 58.77 58.22
TraesCS7B01G084000.1 Wheat plastid 58.29 58.02
TraesCS7A01G178300.1 Wheat extracellular 58.29 58.02
HORVU7Hr1G036720.1 Barley extracellular 57.82 57.55
TraesCS2D01G073600.1 Wheat extracellular 56.4 57.21
KRH19305 Soybean cytosol, extracellular, plastid 57.82 56.22
Zm00001d037513_P001 Maize plastid 56.4 56.13
VIT_07s0005g05920.t01 Wine grape extracellular 54.98 55.5
EES17780 Sorghum extracellular, vacuole 56.87 54.3
VIT_07s0005g05930.t01 Wine grape extracellular 53.55 54.07
VIT_07s0005g05910.t01 Wine grape extracellular 53.55 54.07
VIT_12s0059g00740.t01 Wine grape cytosol 30.81 52.85
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 62.56 51.56
GSMUA_Achr2P18710_001 Banana extracellular 59.24 50.0
VIT_09s0002g01340.t01 Wine grape extracellular, vacuole 52.61 44.76
CDY22633 Canola extracellular 39.34 38.43
CDY06361 Canola extracellular 38.86 37.96
CDY11392 Canola extracellular 39.34 37.73
CDY15231 Canola extracellular, vacuole 38.86 37.61
CDX89983 Canola extracellular, vacuole 38.86 37.61
CDX76609 Canola extracellular 38.86 37.27
CDX93502 Canola extracellular 39.34 37.22
CDY50897 Canola extracellular 38.86 37.1
CDX81907 Canola extracellular 37.44 36.92
CDY21688 Canola extracellular 37.44 36.92
CDY19265 Canola extracellular 37.44 36.92
CDX87040 Canola extracellular 37.91 36.87
CDY20692 Canola extracellular 38.39 36.82
CDY05519 Canola extracellular 37.91 36.7
CDY05327 Canola vacuole 33.65 36.6
CDY19762 Canola extracellular 37.44 36.41
CDY18833 Canola extracellular 37.44 36.24
CDY61117 Canola extracellular 37.44 36.24
CDY26706 Canola extracellular 36.49 35.98
CDX80572 Canola extracellular 36.97 35.78
CDY31080 Canola extracellular 36.97 35.62
CDX82141 Canola vacuole 36.02 34.39
CDY47579 Canola extracellular 30.81 34.21
CDY05213 Canola extracellular 34.12 33.03
CDX74123 Canola extracellular 33.65 32.57
CDY49987 Canola extracellular 33.18 32.11
CDY22215 Canola extracellular 33.65 31.42
CDY41321 Canola extracellular 33.65 31.42
CDX68163 Canola extracellular 31.28 30.14
CDY07800 Canola vacuole 26.54 29.32
CDY34891 Canola vacuole 25.59 28.42
CDX85858 Canola extracellular 30.81 28.38
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078GBV7UniProt:A0A078GBV7EnsemblPlants:CDX85429ProteinID:CDX85429
ProteinID:CDX85429.1ProteinID:CDY16549.1ProteinID:CDY22866.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0005576GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00143118001
InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
PANTHER:PTHR31238PANTHER:PTHR31238:SF92InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182
SignalP:SignalP-noTMUniParc:UPI0002544C0CSEG:seg:::
Description
BnaA02g03840DBnaA02g03840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBV7]
Coordinates
chrLK031842:-:7314..9140
Molecular Weight (calculated)
21902.4 Da
IEP (calculated)
6.508
GRAVY (calculated)
0.366
Length
211 amino acids
Sequence
(BLAST)
001: MKMIIHIFFI LSLVSSTSFA SVLDFCVADP KGPQNPSGYS CKNPDQVTEN DFAFSGLAKA GNTSNIIKAA VTPAFAPAFA GLNGLDVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIS AGFISSANKV YLKTLSRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDEEV
201: KKLKGVLGGT N
Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)
001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
Arabidopsis Description
GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.