Factsheet for VIT_07s0005g05920.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g05910.t01	Wine grape	extracellular	97.13	97.13
VIT_07s0005g05930.t01	Wine grape	extracellular	97.13	97.13
VIT_18s0086g00410.t01	Wine grape	extracellular	77.03	77.03
VIT_09s0002g01320.t01	Wine grape	extracellular	75.12	75.12
VIT_18s0086g00590.t01	Wine grape	cytosol	41.15	69.92
VIT_12s0059g00740.t01	Wine grape	cytosol	35.89	60.98
VIT_11s0016g01220.t01	Wine grape	extracellular	57.42	57.69
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	26.79	56.57
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.46	55.92
CDY51841	Canola	extracellular, plasma membrane, vacuole	56.46	55.92
CDY16549	Canola	extracellular	55.5	54.98
CDY22866	Canola	extracellular	55.5	54.98
CDX92448	Canola	extracellular	55.5	54.98
CDX85429	Canola	extracellular	55.5	54.98
CDX70935	Canola	extracellular, vacuole	55.5	54.98
Bra002316.1-P	Field mustard	extracellular	55.5	54.98
CDY45080	Canola	extracellular, plasma membrane, vacuole	55.02	54.5
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.02	54.5
Solyc03g123410.1.1	Tomato	nucleus	54.07	54.33
PGSC0003DMT400030317	Potato	extracellular	53.59	53.85
PGSC0003DMT400036428	Potato	extracellular	53.59	53.85
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	54.07	53.55
Os08t0460000-01	Rice	extracellular	54.07	53.05
TraesCS7A01G178300.1	Wheat	extracellular	53.59	52.83
TraesCS2B01G090300.1	Wheat	extracellular	53.11	52.36
TraesCS2D01G073600.1	Wheat	extracellular	51.67	51.92
TraesCS7B01G084000.1	Wheat	plastid	52.63	51.89
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	52.63	51.89
HORVU7Hr1G036720.1	Barley	extracellular	52.63	51.89
TraesCS2D01G073700.1	Wheat	extracellular	52.15	51.42
TraesCS2A01G075000.1	Wheat	extracellular	51.67	50.7
Zm00001d037513_P001	Maize	plastid	51.2	50.47
EES17780	Sorghum	extracellular, vacuole	51.2	48.42
CDY45077	Canola	extracellular	48.8	48.11
CDY27880	Canola	extracellular	48.8	48.11
Bra020115.1-P	Field mustard	extracellular	48.8	48.11
CDY45079	Canola	extracellular, vacuole	48.33	46.12
Bra020114.1-P	Field mustard	extracellular, vacuole	48.33	46.12
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	54.07	45.56
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	53.59	43.75
GSMUA_Achr2P18710_001	Banana	extracellular	49.76	41.6
VIT_14s0060g00120.t01	Wine grape	extracellular	39.71	38.25
VIT_07s0005g02380.t01	Wine grape	extracellular	37.8	36.41
VIT_08s0007g03430.t01	Wine grape	cytosol	33.97	34.98
VIT_07s0005g02370.t01	Wine grape	extracellular	35.89	34.56
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	34.45	31.58
VIT_01s0026g00970.t01	Wine grape	extracellular	32.06	30.32

Protein Annotations

EntrezGene:100853851	wikigene:100853851	Gene3D:2.60.120.10	MapMan:35.1	ProteinID:CCB60258	ProteinID:CCB60258.1
InterPro:Cupin_1	UniProt:F6HZZ2	EMBL:FN596502	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006139	GO:GO:0006259
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0015074	GO:GO:0030145	GO:GO:0030312
GO:GO:0045735	GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EntrezGene:LOC100853851
wikigene:LOC100853851	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF92
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI000210970E
ArrayExpress:VIT_07s0005g05920	EnsemblPlantsGene:VIT_07s0005g05920	EnsemblPlants:VIT_07s0005g05920.t01	RefSeq:XP_003632366	RefSeq:XP_003632366.1	SEG:seg

Description

No Description!

Coordinates

chr7:+:10351085..10351718

Molecular Weight (calculated)

21935.2 Da

IEP (calculated)

4.682

GRAVY (calculated)

0.346

Length

209 amino acids

Sequence
(BLAST)

001: MLHILALFSF LLVSSSHAAL QDFCVADFTA PQGPTGYSCR TPAEVTADDF VYSGLRQPGN TSSIFNASVN SAFVHKFPVL NGLGVSLARA DVAPGGVFPL
101: HTHPGATEII LVARGAVTAG LISSDNTVYV KTVEEGDIMV FPQGLLHFVV NNGGTEALIW VSFSSPSPGL QVLNTALFGN NLDSDLLEKI TLLGDDEVQR
201: LKGIFGGTG

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.