Factsheet for Bra020113.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45080	Canola	extracellular, plasma membrane, vacuole	100.0	100.0
Bra002316.1-P	Field mustard	extracellular	95.73	95.73
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	93.84	93.84
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	92.89	92.89
Bra020115.1-P	Field mustard	extracellular	78.67	78.3
Bra020114.1-P	Field mustard	extracellular, vacuole	79.62	76.71
KRH02617	Soybean	nucleus	68.72	69.71
VIT_18s0086g00590.t01	Wine grape	cytosol	39.34	67.48
KRH12528	Soybean	extracellular	67.77	67.14
PGSC0003DMT400036428	Potato	extracellular	64.45	65.38
PGSC0003DMT400030317	Potato	extracellular	63.98	64.9
Solyc03g123410.1.1	Tomato	nucleus	63.98	64.9
Bra003874.1-P	Field mustard	extracellular	63.03	64.25
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	28.91	61.62
VIT_09s0002g01320.t01	Wine grape	extracellular	60.19	60.77
TraesCS2D01G073700.1	Wheat	extracellular	60.66	60.38
TraesCS2B01G090300.1	Wheat	extracellular	60.66	60.38
VIT_18s0086g00410.t01	Wine grape	extracellular	59.72	60.29
Bra016047.1-P	Field mustard	vacuole	61.61	59.91
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	60.19	59.91
Os08t0460000-01	Rice	extracellular	60.19	59.62
TraesCS2A01G075000.1	Wheat	extracellular	60.19	59.62
TraesCS7B01G084000.1	Wheat	plastid	59.72	59.43
TraesCS7A01G178300.1	Wheat	extracellular	59.72	59.43
HORVU7Hr1G036720.1	Barley	extracellular	59.24	58.96
TraesCS2D01G073600.1	Wheat	extracellular	57.82	58.65
Zm00001d037513_P001	Maize	plastid	57.82	57.55
KRH19305	Soybean	cytosol, extracellular, plastid	57.82	56.22
EES17780	Sorghum	extracellular, vacuole	58.29	55.66
VIT_07s0005g05920.t01	Wine grape	extracellular	54.5	55.02
VIT_07s0005g05910.t01	Wine grape	extracellular	53.55	54.07
VIT_07s0005g05930.t01	Wine grape	extracellular	53.55	54.07
VIT_12s0059g00740.t01	Wine grape	cytosol	31.28	53.66
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	63.03	51.95
GSMUA_Achr2P18710_001	Banana	extracellular	61.14	51.6
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	52.61	44.76
Bra009907.1-P	Field mustard	cytosol	33.65	38.59
Bra031671.1-P	Field mustard	extracellular	38.86	37.96
Bra031058.1-P	Field mustard	extracellular	38.39	37.85
Bra007652.1-P	Field mustard	extracellular	39.34	37.73
Bra036586.1-P	Field mustard	extracellular	38.39	37.33
Bra020014.1-P	Field mustard	extracellular	39.34	37.22
Bra033314.1-P	Field mustard	extracellular, vacuole	38.39	37.16
Bra040244.1-P	Field mustard	extracellular	38.39	37.16
Bra020528.1-P	Field mustard	extracellular	38.39	37.16
Bra030785.1-P	Field mustard	extracellular	38.39	36.82
Bra031430.1-P	Field mustard	extracellular	32.23	36.17
Bra025704.1-P	Field mustard	extracellular	36.49	35.98
Bra020798.1-P	Field mustard	extracellular	36.02	35.02
Bra001173.1-P	Field mustard	extracellular, vacuole	35.07	33.95
Bra034093.1-P	Field mustard	extracellular	34.12	31.86
Bra003784.1-P	Field mustard	extracellular	32.23	31.05
Bra031713.1-P	Field mustard	vacuole	26.07	28.95

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra020113	EnsemblPlants:Bra020113.1	EnsemblPlants:Bra020113.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M4DUC0	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF92	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00025433B7	SEG:seg	:

Description

AT5G20630 (E=1e-102) GLP3, GLP3A, GLP3B, ATGER3, GER3 | GER3 (GERMIN 3); oxalate oxidase

Coordinates

chrA02:-:5092018..5092653

Molecular Weight (calculated)

21896.4 Da

IEP (calculated)

6.504

GRAVY (calculated)

0.328

Length

211 amino acids

Sequence
(BLAST)

001: MKMIIHIFFI LSLVSSTSFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFSGLAKA GNTSNLIKAA VTPAFAPAFA GTNGLGVSMA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLQRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDEEV
201: KKLKGVLGGT D

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.