Factsheet for Bra031713.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34891	Canola	vacuole	98.42	98.42
AT1G10460.1	Thale cress	extracellular, vacuole	74.21	64.98
KRH74710	Soybean	extracellular	55.26	47.73
VIT_01s0026g00970.t01	Wine grape	extracellular	54.21	46.61
KRH69437	Soybean	extracellular	53.68	46.36
PGSC0003DMT400058298	Potato	extracellular, vacuole	48.95	44.08
Solyc05g006500.2.1	Tomato	extracellular	50.53	43.64
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	40.0	36.02
TraesCS4B01G294100.1	Wheat	extracellular	42.11	35.87
EER95401	Sorghum	vacuole	45.26	35.68
Os03t0179100-00	Rice	extracellular, vacuole	42.11	35.56
GSMUA_Achr1P21920_001	Banana	endoplasmic reticulum, extracellular	43.68	34.87
Zm00001d027890_P001	Maize	extracellular, vacuole	41.58	34.35
TraesCS4D01G293000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.47	32.61
Bra031430.1-P	Field mustard	extracellular	32.11	32.45
Bra031671.1-P	Field mustard	extracellular	36.32	31.94
HORVU4Hr1G076480.3	Barley	vacuole	38.42	31.06
Bra009907.1-P	Field mustard	cytosol	29.47	30.43
Bra020014.1-P	Field mustard	extracellular	35.26	30.04
Bra025704.1-P	Field mustard	extracellular	33.68	29.91
Bra007652.1-P	Field mustard	extracellular	34.21	29.55
Bra020798.1-P	Field mustard	extracellular	33.68	29.49
Bra030785.1-P	Field mustard	extracellular	33.68	29.09
Bra036586.1-P	Field mustard	extracellular	33.16	29.03
Bra031058.1-P	Field mustard	extracellular	32.63	28.97
Bra020528.1-P	Field mustard	extracellular	33.16	28.9
Bra040244.1-P	Field mustard	extracellular	33.16	28.9
Bra033314.1-P	Field mustard	extracellular, vacuole	32.63	28.44
Bra001173.1-P	Field mustard	extracellular, vacuole	31.05	27.06
Bra020115.1-P	Field mustard	extracellular	29.47	26.42
Bra003874.1-P	Field mustard	extracellular	28.42	26.09
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	28.95	26.07
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	28.95	26.07
Bra034093.1-P	Field mustard	extracellular	30.0	25.22
Bra002316.1-P	Field mustard	extracellular	27.89	25.12
Bra016047.1-P	Field mustard	vacuole	27.37	23.96
Bra020114.1-P	Field mustard	extracellular, vacuole	27.37	23.74
Bra003784.1-P	Field mustard	extracellular	26.32	22.83

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra031713	EnsemblPlants:Bra031713.1	EnsemblPlants:Bra031713.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0030145	GO:GO:0045735	InterPro:Germin_Mn-BS	InterPro:IPR014710
UniProt:M4ESD5	PFAM:PF00190	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF5	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00025431B8	SEG:seg

Description

AT1G10460 (E=8e-055) GLP7 | GLP7 (GERMIN-LIKE PROTEIN 7); manganese ion binding / nutrient reservoir

Coordinates

chrA09:+:35104886..35105544

Molecular Weight (calculated)

20257.6 Da

IEP (calculated)

7.125

GRAVY (calculated)

0.146

Length

190 amino acids

Sequence
(BLAST)

001: MLLNLLLAFI LLMGRVSSDP DPLQDYCVSP PLSPHQHIFL NGNLCKDPTK VTVSHFTTSA LSKPGDTRAN PFMTNVTLST TANLPGLNTM GLTMGRIDFG
101: ASGVVPPHVH PRASEVTVCL DGVLLVGFVD TSVSSALAVS GLTSQNPGTQ FVSMVSLDSK LQIPQDVLKR LYHINDQEGY VASIRKNLGG

Best Arabidopsis Sequence Match ( AT1G10460.1 )
(BLAST)

001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG

Arabidopsis Description

GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.