Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058298 | Potato | extracellular, vacuole | 63.8 | 66.82 |
| KRH74710 | Soybean | extracellular | 64.71 | 65.0 |
| Solyc05g006500.2.1 | Tomato | extracellular | 64.25 | 64.55 |
| KRH69437 | Soybean | extracellular | 63.8 | 64.09 |
| TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 56.11 | 58.77 |
| Os03t0179100-00 | Rice | extracellular, vacuole | 59.28 | 58.22 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 55.2 | 56.22 |
| TraesCS4B01G294100.1 | Wheat | extracellular | 56.56 | 56.05 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 59.28 | 55.04 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 57.01 | 54.78 |
| Zm00001d027890_P001 | Maize | extracellular, vacuole | 56.56 | 54.35 |
| Bra031713.1-P | Field mustard | vacuole | 46.61 | 54.21 |
| CDY34891 | Canola | vacuole | 46.61 | 54.21 |
| CDY07800 | Canola | vacuole | 46.15 | 53.4 |
| EER95401 | Sorghum | vacuole | 57.47 | 52.7 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 54.3 | 51.06 |
| VIT_07s0005g02370.t01 | Wine grape | extracellular | 40.72 | 41.47 |
| VIT_09s0002g01330.t01 | Wine grape | cytosol, extracellular, nucleus | 18.1 | 40.4 |
| VIT_14s0060g00120.t01 | Wine grape | extracellular | 39.37 | 40.09 |
| VIT_07s0005g02380.t01 | Wine grape | extracellular | 38.91 | 39.63 |
| VIT_18s0086g00590.t01 | Wine grape | cytosol | 21.72 | 39.02 |
| VIT_09s0002g01320.t01 | Wine grape | extracellular | 34.39 | 36.36 |
| VIT_18s0086g00410.t01 | Wine grape | extracellular | 34.39 | 36.36 |
| VIT_17s0000g05360.t01 | Wine grape | endoplasmic reticulum, extracellular | 37.1 | 35.96 |
| VIT_08s0007g03430.t01 | Wine grape | cytosol | 32.58 | 35.47 |
| VIT_12s0059g00740.t01 | Wine grape | cytosol | 19.0 | 34.15 |
| VIT_11s0016g01220.t01 | Wine grape | extracellular | 31.22 | 33.17 |
| VIT_07s0005g05910.t01 | Wine grape | extracellular | 31.22 | 33.01 |
| VIT_07s0005g05930.t01 | Wine grape | extracellular | 31.22 | 33.01 |
| VIT_07s0005g05920.t01 | Wine grape | extracellular | 30.32 | 32.06 |
| VIT_09s0002g01340.t01 | Wine grape | extracellular, vacuole | 31.22 | 27.82 |
Protein Annotations
| EntrezGene:100246738 | wikigene:100246738 | Gene3D:2.60.120.10 | MapMan:35.1 | ProteinID:CBI32073 | ProteinID:CBI32073.3 |
| InterPro:Cupin_1 | UniProt:D7TNK0 | EMBL:FN596002 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 |
| GO:GO:0046872 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | EntrezGene:LOC100246738 | wikigene:LOC100246738 |
| PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF5 | InterPro:RmlC-like_jellyroll |
| InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI00015CAF52 | ArrayExpress:VIT_01s0026g00970 |
| EnsemblPlantsGene:VIT_01s0026g00970 | EnsemblPlants:VIT_01s0026g00970.t01 | RefSeq:XP_002271090 | RefSeq:XP_002271090.1 | : | : |
Description
No Description!
Coordinates
chr1:+:9901187..9901854
Molecular Weight (calculated)
23508.5 Da
IEP (calculated)
9.989
GRAVY (calculated)
0.153
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTASTLPKL FIAIALLSGL VKPDPDPLQD YCIADTKASK AFFINGVPCI DPQLAQVSHF TTSALSKPGN TSANPFGFSI TLTNTMNLPG FNTMGLTMAR
101: ADIAANGLVP LHSHPRASEV ATLLKGALLV GFIDTSNRLF TQLLRPGDSF VFPKGMIHFL YNLDSLAPAV VLAGLNSQNP GTQLTSTAAF ATNPRLPDEV
201: LKKAFQISGQ DVARIRRNLG G
101: ADIAANGLVP LHSHPRASEV ATLLKGALLV GFIDTSNRLF TQLLRPGDSF VFPKGMIHFL YNLDSLAPAV VLAGLNSQNP GTQLTSTAAF ATNPRLPDEV
201: LKKAFQISGQ DVARIRRNLG G
001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
Arabidopsis Description
GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.