Factsheet for VIT_08s0007g03430.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
vacuole 1
extracellular 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32736	Soybean	extracellular, vacuole	69.95	62.83
KRH30838	Soybean	extracellular	68.97	61.95
Bra034093.1-P	Field mustard	extracellular	57.64	51.77
CDY22215	Canola	extracellular	57.64	51.77
CDY41321	Canola	extracellular	57.64	51.77
Os02t0532500-01	Rice	extracellular	53.69	47.6
Zm00001d016697_P001	Maize	extracellular	53.69	46.58
TraesCS6A01G028700.1	Wheat	extracellular, unclear	51.72	46.05
TraesCS6B01G041100.1	Wheat	extracellular	51.72	46.05
TraesCS6D01G033100.1	Wheat	golgi	51.23	45.61
HORVU6Hr1G005420.1	Barley	extracellular	51.23	45.61
EES06908	Sorghum	extracellular, vacuole	52.22	44.92
AT3G10080.2	Thale cress	mitochondrion	59.11	40.27
VIT_07s0005g02380.t01	Wine grape	extracellular	41.87	39.17
VIT_14s0060g00120.t01	Wine grape	extracellular	39.9	37.33
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	40.39	35.96
VIT_07s0005g02370.t01	Wine grape	extracellular	38.42	35.94
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	17.24	35.35
VIT_18s0086g00590.t01	Wine grape	cytosol	20.69	34.15
VIT_07s0005g05910.t01	Wine grape	extracellular	34.98	33.97
VIT_07s0005g05920.t01	Wine grape	extracellular	34.98	33.97
VIT_07s0005g05930.t01	Wine grape	extracellular	34.98	33.97
VIT_18s0086g00410.t01	Wine grape	extracellular	34.98	33.97
VIT_09s0002g01320.t01	Wine grape	extracellular	33.99	33.01
VIT_11s0016g01220.t01	Wine grape	extracellular	33.5	32.69
VIT_01s0026g00970.t01	Wine grape	extracellular	35.47	32.58
VIT_12s0059g00740.t01	Wine grape	cytosol	18.23	30.08
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	33.99	27.82

Protein Annotations

EntrezGene:100242597	wikigene:100242597	Gene3D:2.60.120.10	MapMan:35.1	ProteinID:CCB55425	ProteinID:CCB55425.1
InterPro:Cupin_1	UniProt:F6HKK3	EMBL:FN595991	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EntrezGene:LOC100242597	wikigene:LOC100242597
PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF48	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	TIGR:TC52213	UniParc:UPI00015CA0C5	ArrayExpress:VIT_08s0007g03430
EnsemblPlantsGene:VIT_08s0007g03430	EnsemblPlants:VIT_08s0007g03430.t01	unigene:Vvi.14710	RefSeq:XP_002282767	RefSeq:XP_002282767.2	:

Description

No Description!

Coordinates

chr8:+:17382936..17383759

Molecular Weight (calculated)

22190.7 Da

IEP (calculated)

7.440

GRAVY (calculated)

-0.150

Length

203 amino acids

Sequence
(BLAST)

001: MAMASDPDPL QDFCIPNTKW GYGRAARLDT VPCKNSSEAT TDDFVFSGLK KPAEEFSNMG IAAVSVTPQM FPGLNTLGMS FVRADIQVGG INAPHFHPRA
101: TEITYVLQGK VYSGFVDSTN RVFATVLEQG EVMVFPRGLV HFQMNVGESP ATVFGCFNSQ NPGVQKIPSA LFGSEIKDEL LEKAFGMTPK QIDKMRRKFV
201: PKG

Best Arabidopsis Sequence Match ( AT3G10080.1 )
(BLAST)

001: MEANTLFLLK ALCLLCFNVC FTLASDPDPI QDFCIPKPVT SPYHDHHFST NLPCKNSSEV TTEDFVFSGL KTAGNFTETG FATVPVGPEN FPGLNTLGIS
101: FVRADLKPGS INPPHYHPRA TEVAHLVKGR VYSGFVDSNN KVYAKVMEEG EMMVYPKGLV HFQMNVGDVT ATIVGGLNSQ NPGIQKIPSV VFGSGINEEL
201: LMKAFGLSLK QIGTLKKRFD PVMSNEH

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI8]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.