Factsheet for VIT_07s0005g05930.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g05910.t01	Wine grape	extracellular	100.0	100.0
VIT_07s0005g05920.t01	Wine grape	extracellular	97.13	97.13
VIT_18s0086g00410.t01	Wine grape	extracellular	77.51	77.51
VIT_09s0002g01320.t01	Wine grape	extracellular	75.6	75.6
VIT_18s0086g00590.t01	Wine grape	cytosol	41.63	70.73
VIT_12s0059g00740.t01	Wine grape	cytosol	36.36	61.79
VIT_11s0016g01220.t01	Wine grape	extracellular	56.46	56.73
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	26.79	56.57
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	55.02	54.5
CDY51841	Canola	extracellular, plasma membrane, vacuole	55.02	54.5
CDX70935	Canola	extracellular, vacuole	54.55	54.03
CDY16549	Canola	extracellular	54.07	53.55
CDY45080	Canola	extracellular, plasma membrane, vacuole	54.07	53.55
CDY22866	Canola	extracellular	54.07	53.55
CDX92448	Canola	extracellular	54.07	53.55
CDX85429	Canola	extracellular	54.07	53.55
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	54.07	53.55
Bra002316.1-P	Field mustard	extracellular	54.07	53.55
Solyc03g123410.1.1	Tomato	nucleus	53.11	53.37
PGSC0003DMT400030317	Potato	extracellular	52.63	52.88
PGSC0003DMT400036428	Potato	extracellular	52.63	52.88
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	52.63	52.13
Os08t0460000-01	Rice	extracellular	53.11	52.11
TraesCS7A01G178300.1	Wheat	extracellular	52.63	51.89
TraesCS2D01G073600.1	Wheat	extracellular	51.2	51.44
TraesCS2B01G090300.1	Wheat	extracellular	52.15	51.42
TraesCS7B01G084000.1	Wheat	plastid	51.67	50.94
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	51.67	50.94
HORVU7Hr1G036720.1	Barley	extracellular	51.67	50.94
TraesCS2D01G073700.1	Wheat	extracellular	51.2	50.47
TraesCS2A01G075000.1	Wheat	extracellular	50.72	49.77
Zm00001d037513_P001	Maize	plastid	50.24	49.53
EES17780	Sorghum	extracellular, vacuole	50.24	47.51
CDY45077	Canola	extracellular	47.85	47.17
CDY27880	Canola	extracellular	47.85	47.17
Bra020115.1-P	Field mustard	extracellular	47.85	47.17
CDY45079	Canola	extracellular, vacuole	47.85	45.66
Bra020114.1-P	Field mustard	extracellular, vacuole	47.85	45.66
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	54.07	45.56
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	52.63	42.97
GSMUA_Achr2P18710_001	Banana	extracellular	48.8	40.8
VIT_14s0060g00120.t01	Wine grape	extracellular	38.28	36.87
VIT_07s0005g02380.t01	Wine grape	extracellular	36.36	35.02
VIT_08s0007g03430.t01	Wine grape	cytosol	33.97	34.98
VIT_07s0005g02370.t01	Wine grape	extracellular	35.41	34.1
VIT_01s0026g00970.t01	Wine grape	extracellular	33.01	31.22
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	33.97	31.14

Protein Annotations

EntrezGene:100251113	wikigene:100251113	EntrezGene:100253440	wikigene:100253440	EntrezGene:100853889	wikigene:100853889
Gene3D:2.60.120.10	MapMan:35.1	ProteinID:CBI37285	ProteinID:CBI37285.3	ProteinID:CBI37287	ProteinID:CBI37287.3
InterPro:Cupin_1	UniProt:D7FBC1	EMBL:FN596502	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EntrezGene:LOC100251113	wikigene:LOC100251113
EntrezGene:LOC100253440	wikigene:LOC100253440	EntrezGene:LOC100853889	wikigene:LOC100853889	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF92	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0001986126	ArrayExpress:VIT_07s0005g05930	EnsemblPlantsGene:VIT_07s0005g05930	EnsemblPlants:VIT_07s0005g05930.t01
RefSeq:XP_002263714	RefSeq:XP_002263714.1	RefSeq:XP_002264949	RefSeq:XP_002264949.1	RefSeq:XP_003632367	RefSeq:XP_003632367.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:10376424..10377236

Molecular Weight (calculated)

21842.1 Da

IEP (calculated)

4.682

GRAVY (calculated)

0.349

Length

209 amino acids

Sequence
(BLAST)

001: MLHILALFSF LLVSSSHAAL QDFCVADFTA PQGPTGYSCR TPAEVTADDF VYSGLRQPGN TSSIFNASIN SASVHKFPVL NGLGVSVARA DVAPGGVLPL
101: HTHPGATEII LVARGAVTAG LISSDNTVYV KTVEEGDIMV FPQGLLHFLV NTGGTEALIW VSFSSPSPGL QVLNTALFGN NLDSDLLEKI TLLGDDEVQR
201: LKGIFGGTG

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.