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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020114.1-P Field mustard extracellular, vacuole 100.0 100.0
CDY27880 Canola extracellular 82.65 85.38
CDY45077 Canola extracellular 82.65 85.38
CDY45080 Canola extracellular, plasma membrane, vacuole 76.71 79.62
CDY51841 Canola extracellular, plasma membrane, vacuole 75.8 78.67
CDY22866 Canola extracellular 75.34 78.2
CDY16549 Canola extracellular 75.34 78.2
CDX92448 Canola extracellular 75.34 78.2
CDX85429 Canola extracellular 75.34 78.2
CDX70935 Canola extracellular, vacuole 74.89 77.73
AT5G20630.1 Thale cress extracellular, plasma membrane, vacuole 73.52 76.3
KRH02617 Soybean nucleus 58.9 62.02
KRH12528 Soybean extracellular 57.08 58.69
CDX68260 Canola extracellular, vacuole 54.79 57.97
PGSC0003DMT400036428 Potato extracellular 54.79 57.69
PGSC0003DMT400030317 Potato extracellular 54.79 57.69
Solyc03g123410.1.1 Tomato nucleus 53.88 56.73
CDY11164 Canola extracellular, vacuole 53.42 56.52
VIT_09s0002g01320.t01 Wine grape extracellular 53.42 55.98
VIT_18s0086g00590.t01 Wine grape cytosol 31.05 55.28
VIT_18s0086g00410.t01 Wine grape extracellular 52.51 55.02
VIT_09s0002g01330.t01 Wine grape cytosol, extracellular, nucleus 24.66 54.55
TraesCS7D01G180200.1 Wheat extracellular, vacuole 52.05 53.77
TraesCS2B01G090300.1 Wheat extracellular 52.05 53.77
TraesCS2D01G073600.1 Wheat extracellular 50.68 53.37
HORVU7Hr1G036720.1 Barley extracellular 51.6 53.3
TraesCS2D01G073700.1 Wheat extracellular 51.6 53.3
TraesCS7A01G178300.1 Wheat extracellular 51.6 53.3
TraesCS7B01G084000.1 Wheat plastid 51.6 53.3
CDX96421 Canola vacuole 52.51 53.0
TraesCS2A01G075000.1 Wheat extracellular 51.14 52.58
CDX72929 Canola vacuole 51.6 52.07
Os08t0460000-01 Rice extracellular 49.77 51.17
Zm00001d037513_P001 Maize plastid 47.49 49.06
KRH19305 Soybean cytosol, extracellular, plastid 48.4 48.85
VIT_07s0005g05920.t01 Wine grape extracellular 46.12 48.33
EES17780 Sorghum extracellular, vacuole 48.4 47.96
VIT_07s0005g05910.t01 Wine grape extracellular 45.66 47.85
VIT_07s0005g05930.t01 Wine grape extracellular 45.66 47.85
VIT_12s0059g00740.t01 Wine grape cytosol 26.03 46.34
GSMUA_Achr2P18710_001 Banana extracellular 52.05 45.6
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 52.05 44.53
VIT_09s0002g01340.t01 Wine grape extracellular, vacuole 44.29 39.11
CDY06361 Canola extracellular 36.07 36.57
CDX87040 Canola extracellular 36.07 36.41
CDY05519 Canola extracellular 36.07 36.24
CDY22633 Canola extracellular 35.62 36.11
CDY19762 Canola extracellular 35.62 35.94
CDY11392 Canola extracellular 36.07 35.91
CDX93502 Canola extracellular 36.53 35.87
CDY18833 Canola extracellular 35.62 35.78
CDY50897 Canola extracellular 36.07 35.75
CDY19265 Canola extracellular 34.7 35.51
CDY21688 Canola extracellular 34.7 35.51
CDX81907 Canola extracellular 34.7 35.51
CDY20692 Canola extracellular 35.62 35.45
CDX76609 Canola extracellular 35.62 35.45
CDY61117 Canola extracellular 35.16 35.32
CDY15231 Canola extracellular, vacuole 35.16 35.32
CDX89983 Canola extracellular, vacuole 35.16 35.32
CDY26706 Canola extracellular 34.25 35.05
CDX80572 Canola extracellular 34.7 34.86
CDY05327 Canola vacuole 30.59 34.54
CDY31080 Canola extracellular 34.25 34.25
CDY47579 Canola extracellular 28.77 33.16
CDY05213 Canola extracellular 32.88 33.03
CDX74123 Canola extracellular 32.88 33.03
CDX82141 Canola vacuole 32.88 32.58
CDY49987 Canola extracellular 31.96 32.11
CDY41321 Canola extracellular 31.51 30.53
CDY22215 Canola extracellular 31.51 30.53
CDX68163 Canola extracellular 29.68 29.68
CDY07800 Canola vacuole 25.57 29.32
CDY34891 Canola vacuole 24.2 27.89
CDX85858 Canola extracellular 28.31 27.07
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078I6Q4UniProt:A0A078I6Q4EnsemblPlants:CDY45079ProteinID:CDY45079
ProteinID:CDY45079.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00081357001InterPro:GerminInterPro:IPR014710
PFAM:PF00190PRINTS:PR00325PANTHER:PTHR31238PANTHER:PTHR31238:SF92InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sf
SMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI00025433B8SEG:seg:
Description
BnaA02g04970DBnaA02g04970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6Q4]
Coordinates
chrLK032613:+:95960..96619
Molecular Weight (calculated)
22599.3 Da
IEP (calculated)
6.093
GRAVY (calculated)
0.402
Length
219 amino acids
Sequence
(BLAST)
001: MKMIIRIFFM ILSLVSSISS ASVQDFCIAD PSGPQSPSGY SCKNPDQVTA DDFAFSGLAK SGNTSNMIKA AVATGFAPAF AGVNGLGVSV ARLDLAEGGV
101: VPIHIHSGAS EVLIVIEGTI RAGIISSANK VYLKTLQKGE VIVFPQGLLH FALNGGTGPA MAFAAFGSSN PGVQLVPNAL FASDLPAELV EATNFLSHEE
201: VKRLKGVLGG TNEPSLSLY
Best Arabidopsis Sequence Match ( AT5G61750.1 )
(BLAST)
001: MKFFVVIVFC AIFLSVSGDS DNMQDTCPTA PGEQSIFFIN GYPCKNPTKI TAQDFKSTKL TEAGDTDNYL QSNVTLLTAL EFPGLNTLGL SVSRTDLERD
101: GSVPFHSHPR SSEMLFVVKG VVFAGFVDTN NKIFQTVLQK GDVFVFPKGL LHFCLSGGFE PATAFSFYNS QNPGVVNIGE VFGIDQEHIK IMTRCLATGS
201: GCRVTDGDEL
Arabidopsis Description
Germin-like protein subfamily 3 member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLT3]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.