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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06361 Canola extracellular 98.61 98.61
CDX93502 Canola extracellular 92.59 89.69
CDY50897 Canola extracellular 91.67 89.59
CDY20692 Canola extracellular 89.35 87.73
AT1G09560.1 Thale cress extracellular 88.89 87.67
CDY31080 Canola extracellular 87.96 86.76
GSMUA_Achr8P18750_001 Banana extracellular, vacuole 67.13 67.13
GSMUA_Achr5P18440_001 Banana extracellular 68.06 67.12
GSMUA_Achr1P25160_001 Banana extracellular 66.67 65.75
GSMUA_AchrUn_... Banana extracellular 65.74 65.14
TraesCS3A01G165500.1 Wheat extracellular 65.28 64.09
TraesCS3B01G200200.1 Wheat extracellular 64.81 63.64
TraesCS3D01G176100.1 Wheat extracellular 64.81 63.64
Os05t0277500-01 Rice extracellular 64.35 62.9
TraesCS1A01G080000.1 Wheat extracellular 63.43 61.16
Os01t0249200-01 Rice extracellular 63.89 60.79
PGSC0003DMT400047067 Potato cytosol 59.26 60.66
EES02420 Sorghum extracellular 63.43 60.62
PGSC0003DMT400047065 Potato cytosol, extracellular 58.8 60.48
TraesCS1D01G081700.1 Wheat extracellular 62.5 60.27
TraesCS1B01G098000.1 Wheat extracellular 62.96 60.18
CDX76609 Canola extracellular 60.65 59.55
CDX89983 Canola extracellular, vacuole 59.72 59.17
CDY15231 Canola extracellular, vacuole 59.26 58.72
GSMUA_Achr8P29820_001 Banana extracellular 62.5 58.7
Solyc01g102390.2.1 Tomato extracellular 59.72 58.64
CDY11392 Canola extracellular 59.72 58.64
Solyc01g102400.2.1 Tomato extracellular 59.72 58.64
Solyc01g102380.2.1 Tomato extracellular 60.65 58.48
CDY19762 Canola extracellular 57.87 57.6
CDX80572 Canola extracellular 57.87 57.34
CDY05519 Canola extracellular 57.41 56.88
EER95948 Sorghum extracellular 60.65 56.71
CDX87040 Canola extracellular 56.94 56.68
CDY61117 Canola extracellular 56.94 56.42
Zm00001d018954_P002 Maize extracellular 60.19 56.28
CDY18833 Canola extracellular 56.02 55.5
CDY05327 Canola vacuole 49.54 55.15
CDY05213 Canola extracellular 55.56 55.05
CDY47579 Canola extracellular 45.83 52.11
CDX74123 Canola extracellular 52.31 51.83
CDY49987 Canola extracellular 51.85 51.38
HORVU3Hr1G034100.2 Barley cytosol, plastid 60.65 49.62
CDX81907 Canola extracellular 45.83 46.26
CDY19265 Canola extracellular 45.83 46.26
CDY21688 Canola extracellular 45.37 45.79
CDY26706 Canola extracellular 44.91 45.33
KXG32174 Sorghum plastid 63.89 43.67
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 62.96 40.6
CDY51841 Canola extracellular, plasma membrane, vacuole 39.35 40.28
CDX70935 Canola extracellular, vacuole 38.89 39.81
CDY16549 Canola extracellular 38.43 39.34
CDX92448 Canola extracellular 38.43 39.34
CDX85429 Canola extracellular 38.43 39.34
CDY22866 Canola extracellular 38.43 39.34
CDY45080 Canola extracellular, plasma membrane, vacuole 38.43 39.34
CDY27880 Canola extracellular 37.5 38.21
CDY45077 Canola extracellular 37.5 38.21
CDY11164 Canola extracellular, vacuole 36.11 37.68
CDX68260 Canola extracellular, vacuole 36.11 37.68
CDX96421 Canola vacuole 37.5 37.33
CDY34891 Canola vacuole 32.41 36.84
CDY45079 Canola extracellular, vacuole 36.11 35.62
CDY07800 Canola vacuole 31.48 35.6
CDX72929 Canola vacuole 35.65 35.48
CDY41321 Canola extracellular 37.04 35.4
CDY22215 Canola extracellular 37.04 35.4
CDX68163 Canola extracellular 35.65 35.16
CDX85858 Canola extracellular 34.26 32.31
CDX82141 Canola vacuole 25.0 24.43
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078GDC4UniProt:A0A078GDC4EnsemblPlants:CDY22633ProteinID:CDY22633
ProteinID:CDY22633.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00019302001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF39
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0001B63893
Description
BnaC08g42670DBnaC08g42670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDC4]
Coordinates
chrLK032134:-:188331..189132
Molecular Weight (calculated)
22738.3 Da
IEP (calculated)
8.241
GRAVY (calculated)
0.135
Length
216 amino acids
Sequence
(BLAST)
001: MASPTPFLSI FLFFLITVSA DPDMLQDLCV ADLSSGIKVN GFPCKDAANV TSLDFFSQAL ANPGLTNNTF GALVTGANVM NLPGLNTLGV SLSRIDYAPG
101: GSNPPHTHPR ATEVVYVLQG TLDVGFLTTA NKLISQSLKK GDVFAFPKGL VHFQKNNGDV PASVIAAFNS QLPGTQSLGA TLFGSTPPVP DEILAQAFQT
201: SSGTVKHIKT RFQPKK
Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.