CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G200200.1	Wheat	extracellular	77.88	80.0
TraesCS3D01G176100.1	Wheat	extracellular	77.43	79.55
TraesCS3A01G165500.1	Wheat	extracellular	77.43	79.55
Os01t0249200-01	Rice	extracellular	79.65	79.3
KXG32174	Sorghum	plastid	97.79	69.94
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	65.49	68.52
GSMUA_Achr1P25160_001	Banana	extracellular	65.93	68.04
GSMUA_AchrUn_...	Banana	extracellular	65.49	67.89
EES02802	Sorghum	extracellular	65.49	67.58
KRG96655	Soybean	extracellular, vacuole	64.6	66.67
KRH68383	Soybean	nucleus	64.16	66.51
VIT_14s0060g00120.t01	Wine grape	extracellular	62.83	65.44
EER95948	Sorghum	extracellular	66.81	65.37
GSMUA_Achr5P18440_001	Banana	extracellular	63.27	65.3
KRG90420	Soybean	extracellular, nucleus	63.72	64.29
GSMUA_Achr8P29820_001	Banana	extracellular	65.04	63.91
CDY06361	Canola	extracellular	61.06	63.89
Bra031671.1-P	Field mustard	extracellular	61.06	63.89
KRH33715	Soybean	nucleus	62.83	63.68
AT1G09560.1	Thale cress	extracellular	61.5	63.47
CDY22633	Canola	extracellular	60.62	63.43
VIT_07s0005g02380.t01	Wine grape	extracellular	60.18	62.67
CDX76609	Canola	extracellular	60.62	62.27
CDY11392	Canola	extracellular	60.62	62.27
Bra007652.1-P	Field mustard	extracellular	60.62	62.27
CDY31080	Canola	extracellular	60.18	62.1
PGSC0003DMT400047067	Potato	cytosol	57.96	62.09
CDY50897	Canola	extracellular	60.62	61.99
CDX93502	Canola	extracellular	61.06	61.88
AT3G62020.1	Thale cress	extracellular, vacuole	60.18	61.82
Bra020014.1-P	Field mustard	extracellular	60.62	61.44
PGSC0003DMT400047065	Potato	cytosol, extracellular	57.08	61.43
Bra030785.1-P	Field mustard	extracellular	59.73	61.36
CDY20692	Canola	extracellular	59.73	61.36
HORVU3Hr1G034100.2	Barley	cytosol, plastid	71.24	60.98
EES02060	Sorghum	extracellular	60.18	60.71
KRH33687	Soybean	extracellular	59.29	60.63
KRH33688	Soybean	extracellular	58.85	60.45
AT1G02335.1	Thale cress	extracellular, vacuole	57.96	59.82
KRG96631	Soybean	extracellular, vacuole	48.23	59.24
Solyc01g102390.2.1	Tomato	extracellular	57.52	59.09
CDX89983	Canola	extracellular, vacuole	56.64	58.72
Bra033314.1-P	Field mustard	extracellular, vacuole	56.64	58.72
EES04228	Sorghum	extracellular	58.41	58.67
Solyc01g102400.2.1	Tomato	extracellular	57.08	58.64
CDY15231	Canola	extracellular, vacuole	56.19	58.26
Solyc01g102380.2.1	Tomato	extracellular	57.52	58.04
KRH69151	Soybean	cytosol	38.5	56.86
VIT_07s0005g02370.t01	Wine grape	extracellular	54.42	56.68
EES02061	Sorghum	extracellular	56.64	53.78
EER91050	Sorghum	extracellular	42.92	43.11
EES01342	Sorghum	extracellular, vacuole	41.59	42.53
EER93258	Sorghum	endoplasmic reticulum, extracellular	43.36	42.06
EES17780	Sorghum	extracellular, vacuole	37.17	38.01
EES06908	Sorghum	extracellular, vacuole	39.38	37.71
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	36.28	37.61
EES15103	Sorghum	extracellular	35.84	36.82
EER95401	Sorghum	vacuole	38.05	35.68

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:8056583	UniProt:C5XP61	InterPro:Cupin_1	EnsemblPlants:EES02420
ProteinID:EES02420	ProteinID:EES02420.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506
GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF22	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
EnsemblPlantsGene:SORBI_3003G060000	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A85127	RefSeq:XP_002457300.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:5300876..5303810

Molecular Weight (calculated)

23155.8 Da

IEP (calculated)

6.784

GRAVY (calculated)

0.261

Length

226 amino acids

Sequence
(BLAST)

001: MAARAPSSLL LGAVAVALVL AAAPSALAGD PDYLQDLCVA DLNSAVKVNG FPCKAAEAAT ADDFFTSILA TPGGTNTTSG SVVTGANVEK VPGLNTLGVS
101: LSRIDYAPGG VNPPHTHPRA TELVFVLYGA LDVGFVTTAN KLVARTIARG DVFAFPRGLV HFQRNPGTEP AAVISAFNSQ LPGTQSIAMT LFGASPDLPD
201: QVLAKAFQIP DEEVAKIKAK FAPKKG

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.