Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | extracellular | 86.76 | 87.16 |
| GSMUA_Achr8P18750_001 | Banana | extracellular, vacuole | 83.56 | 84.72 |
| GSMUA_Achr5P18440_001 | Banana | extracellular | 82.65 | 82.65 |
| GSMUA_Achr8P29820_001 | Banana | extracellular | 82.19 | 78.26 |
| Os05t0277500-01 | Rice | extracellular | 76.26 | 75.57 |
| VIT_14s0060g00120.t01 | Wine grape | extracellular | 73.97 | 74.65 |
| KRH68383 | Soybean | nucleus | 73.52 | 73.85 |
| KRG96655 | Soybean | extracellular, vacuole | 73.06 | 73.06 |
| TraesCS3B01G200200.1 | Wheat | extracellular | 73.06 | 72.73 |
| TraesCS3D01G176100.1 | Wheat | extracellular | 72.6 | 72.27 |
| TraesCS1D01G081700.1 | Wheat | extracellular | 73.52 | 71.88 |
| TraesCS1A01G080000.1 | Wheat | extracellular | 73.52 | 71.88 |
| TraesCS3A01G165500.1 | Wheat | extracellular | 72.15 | 71.82 |
| TraesCS1B01G098000.1 | Wheat | extracellular | 73.97 | 71.68 |
| KRH33687 | Soybean | extracellular | 72.15 | 71.49 |
| KRH33688 | Soybean | extracellular | 71.69 | 71.36 |
| VIT_07s0005g02380.t01 | Wine grape | extracellular | 70.32 | 70.97 |
| KRH33715 | Soybean | nucleus | 71.23 | 69.96 |
| KRG90420 | Soybean | extracellular, nucleus | 70.78 | 69.2 |
| PGSC0003DMT400047067 | Potato | cytosol | 66.21 | 68.72 |
| PGSC0003DMT400047065 | Potato | cytosol, extracellular | 65.75 | 68.57 |
| AT1G09560.1 | Thale cress | extracellular | 68.04 | 68.04 |
| KRG96631 | Soybean | extracellular, vacuole | 57.08 | 67.93 |
| CDY06361 | Canola | extracellular | 66.21 | 67.13 |
| Bra031671.1-P | Field mustard | extracellular | 66.21 | 67.13 |
| EER95948 | Sorghum | extracellular | 70.78 | 67.1 |
| Os01t0249200-01 | Rice | extracellular | 69.41 | 66.96 |
| Solyc01g102390.2.1 | Tomato | extracellular | 67.12 | 66.82 |
| CDY31080 | Canola | extracellular | 66.67 | 66.67 |
| CDY22633 | Canola | extracellular | 65.75 | 66.67 |
| Solyc01g102400.2.1 | Tomato | extracellular | 66.67 | 66.36 |
| EES02420 | Sorghum | extracellular | 68.04 | 65.93 |
| CDY20692 | Canola | extracellular | 66.21 | 65.91 |
| Bra030785.1-P | Field mustard | extracellular | 66.21 | 65.91 |
| Zm00001d018954_P002 | Maize | extracellular | 69.41 | 65.8 |
| CDX93502 | Canola | extracellular | 66.21 | 65.02 |
| KRH69151 | Soybean | cytosol | 45.21 | 64.71 |
| CDY50897 | Canola | extracellular | 65.3 | 64.71 |
| Bra020014.1-P | Field mustard | extracellular | 65.75 | 64.57 |
| Solyc01g102380.2.1 | Tomato | extracellular | 65.75 | 64.29 |
| VIT_07s0005g02370.t01 | Wine grape | extracellular | 63.47 | 64.06 |
| HORVU3Hr1G034100.2 | Barley | cytosol, plastid | 67.12 | 55.68 |
| GSMUA_AchrUn_... | Banana | extracellular | 40.64 | 55.62 |
| GSMUA_Achr4P17250_001 | Banana | extracellular | 45.66 | 55.25 |
| KXG32174 | Sorghum | plastid | 68.95 | 47.78 |
| HORVU1Hr1G017170.1 | Barley | extracellular, plastid, vacuole | 73.06 | 47.76 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 39.27 | 36.13 |
| GSMUA_Achr9P16110_001 | Banana | plasma membrane, plastid, vacuole | 38.36 | 32.81 |
| GSMUA_Achr2P18710_001 | Banana | extracellular | 36.53 | 32.0 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr1G25160_001 | EnsemblPlants:GSMUA_Achr1P25160_001 |
| EnsemblPlants:GSMUA_Achr1T25160_001 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | UniProt:M0S2X3 | PFAM:PF00190 |
| PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF18 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI000295B925 | SEG:seg | : |
Description
Germin-like protein 5-1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G25160_001]
Coordinates
chr1:+:19572733..19573737
Molecular Weight (calculated)
22904.9 Da
IEP (calculated)
7.442
GRAVY (calculated)
0.241
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKPSLLLLA FFSLLVVPPC LAADPDMLQD ICVADPGSGV KLNGFACKPA ENVTEADFFF KGLATPGATN NTMGSLVTGA NVEKIPGLNT LGVSMSRIDY
101: APGGLNPPHT HPRATEIVFV LDGTLDVGFI TTANKLIAKT ITKGEVFVFP RGLVHFQKNN GAVPAAVIAG FNSQLPGTQS IAATLFAATP TVPDDVLAKA
201: FQIGTKEVED IKSRLAPKK
101: APGGLNPPHT HPRATEIVFV LDGTLDVGFI TTANKLIAKT ITKGEVFVFP RGLVHFQKNN GAVPAAVIAG FNSQLPGTQS IAATLFAATP TVPDDVLAKA
201: FQIGTKEVED IKSRLAPKK
001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV
Arabidopsis Description
GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.