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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • cytosol 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033314.1-P Field mustard extracellular, vacuole 97.71 97.71
CDX89983 Canola extracellular, vacuole 97.71 97.71
AT1G02335.1 Thale cress extracellular, vacuole 90.37 89.95
CDY11392 Canola extracellular 69.27 68.64
CDX76609 Canola extracellular 68.35 67.73
VIT_07s0005g02380.t01 Wine grape extracellular 62.39 62.67
KRH33687 Soybean extracellular 63.3 62.44
TraesCS3B01G200200.1 Wheat extracellular 62.39 61.82
TraesCS3D01G176100.1 Wheat extracellular 62.39 61.82
TraesCS3A01G165500.1 Wheat extracellular 61.93 61.36
KRH33688 Soybean extracellular 61.47 60.91
KRG96631 Soybean extracellular, vacuole 51.38 60.87
Os01t0249200-01 Rice extracellular 63.3 60.79
TraesCS1A01G080000.1 Wheat extracellular 62.39 60.71
TraesCS1D01G081700.1 Wheat extracellular 62.39 60.71
TraesCS1B01G098000.1 Wheat extracellular 62.84 60.62
Os05t0277500-01 Rice extracellular 61.01 60.18
CDY31080 Canola extracellular 60.09 59.82
CDY50897 Canola extracellular 60.55 59.73
CDY06361 Canola extracellular 59.17 59.72
CDY20692 Canola extracellular 60.09 59.55
CDY22633 Canola extracellular 58.72 59.26
CDX93502 Canola extracellular 60.55 59.19
KRH69151 Soybean cytosol 41.28 58.82
Zm00001d018954_P002 Maize extracellular 59.63 56.28
EES02420 Sorghum extracellular 58.26 56.19
EER95948 Sorghum extracellular 58.26 54.98
VIT_07s0005g02370.t01 Wine grape extracellular 53.21 53.46
CDY05519 Canola extracellular 52.75 52.75
CDX87040 Canola extracellular 51.83 52.07
CDY18833 Canola extracellular 51.83 51.83
CDY05213 Canola extracellular 51.83 51.83
CDY49987 Canola extracellular 51.83 51.83
CDY19762 Canola extracellular 51.38 51.61
CDY05327 Canola vacuole 45.87 51.55
CDY61117 Canola extracellular 51.38 51.38
CDX74123 Canola extracellular 51.38 51.38
CDX80572 Canola extracellular 50.92 50.92
HORVU3Hr1G034100.2 Barley cytosol, plastid 58.26 48.11
CDY47579 Canola extracellular 41.28 47.37
CDX81907 Canola extracellular 45.87 46.73
CDY19265 Canola extracellular 45.87 46.73
CDY26706 Canola extracellular 45.41 46.26
CDY21688 Canola extracellular 45.41 46.26
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 62.39 40.6
KXG32174 Sorghum plastid 58.72 40.51
CDX85429 Canola extracellular 37.61 38.86
CDY51841 Canola extracellular, plasma membrane, vacuole 37.61 38.86
CDY16549 Canola extracellular 37.61 38.86
CDY22866 Canola extracellular 37.61 38.86
CDX92448 Canola extracellular 37.61 38.86
CDX68260 Canola extracellular, vacuole 36.7 38.65
CDY45080 Canola extracellular, plasma membrane, vacuole 37.16 38.39
CDX70935 Canola extracellular, vacuole 36.7 37.91
CDY11164 Canola extracellular, vacuole 35.78 37.68
CDX96421 Canola vacuole 36.7 36.87
CDY27880 Canola extracellular 35.78 36.79
CDY45077 Canola extracellular 35.78 36.79
CDX68163 Canola extracellular 36.24 36.07
CDX72929 Canola vacuole 35.78 35.94
CDY45079 Canola extracellular, vacuole 35.32 35.16
CDY22215 Canola extracellular 36.24 34.96
CDY41321 Canola extracellular 36.24 34.96
CDX85858 Canola extracellular 35.32 33.62
CDY34891 Canola vacuole 28.9 33.16
CDY07800 Canola vacuole 27.52 31.41
CDX82141 Canola vacuole 24.31 23.98
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078FQ13UniProt:A0A078FQ13EnsemblPlants:CDY15231ProteinID:CDY15231
ProteinID:CDY15231.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00085427001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF18
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EED64B
SEG:seg:::::
Description
BnaC05g01100DBnaC05g01100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ13]
Coordinates
chrLK032052:-:588862..590067
Molecular Weight (calculated)
23223.0 Da
IEP (calculated)
7.982
GRAVY (calculated)
0.125
Length
218 amino acids
Sequence
(BLAST)
001: MMNSRIFITT VLSCIIASIH AYDPDALQDL CVADKSHGTK LNGFPCKEMS NITSSDFFFG GISSPAVINS TMGSAVTGAN VEKIPGLNTL SVSLARIDYA
101: PGGLNPPHTH PRATEVVFVL EGELEVGFIA TSNKLFSQTI KTGEVFVFPR GLVHFQKNNG KSPASVLCAF NSQLPGTVSV AATLFAADPA LPEDVLTKTF
201: QVGSKMVDKI KERLSTKK
Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.