Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 5
- extracellular 4
- endoplasmic reticulum 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027890_P001 | Maize | extracellular, vacuole | 82.99 | 86.96 |
| TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 68.88 | 78.67 |
| Os03t0179100-00 | Rice | extracellular, vacuole | 73.44 | 78.67 |
| TraesCS4B01G294100.1 | Wheat | extracellular | 66.81 | 72.2 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 68.05 | 71.3 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 64.73 | 66.38 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 59.75 | 60.5 |
| VIT_01s0026g00970.t01 | Wine grape | extracellular | 52.7 | 57.47 |
| PGSC0003DMT400058298 | Potato | extracellular, vacuole | 46.06 | 52.61 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 46.47 | 51.61 |
| KRH74710 | Soybean | extracellular | 46.89 | 51.36 |
| Solyc05g006500.2.1 | Tomato | extracellular | 46.06 | 50.45 |
| KRH69437 | Soybean | extracellular | 46.06 | 50.45 |
| Bra031713.1-P | Field mustard | vacuole | 35.68 | 45.26 |
| CDY34891 | Canola | vacuole | 35.68 | 45.26 |
| CDY07800 | Canola | vacuole | 34.85 | 43.98 |
| EES02802 | Sorghum | extracellular | 36.51 | 40.18 |
| EES02060 | Sorghum | extracellular | 37.34 | 40.18 |
| EES04228 | Sorghum | extracellular | 35.68 | 38.22 |
| EER95948 | Sorghum | extracellular | 36.51 | 38.1 |
| EES02420 | Sorghum | extracellular | 35.68 | 38.05 |
| EES01342 | Sorghum | extracellular, vacuole | 33.61 | 36.65 |
| EES02061 | Sorghum | extracellular | 34.44 | 34.87 |
| EER91050 | Sorghum | extracellular | 31.95 | 34.22 |
| EER93258 | Sorghum | endoplasmic reticulum, extracellular | 32.78 | 33.91 |
| EES06908 | Sorghum | extracellular, vacuole | 31.95 | 32.63 |
| EES17780 | Sorghum | extracellular, vacuole | 29.46 | 32.13 |
| EES15104 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 26.14 | 28.9 |
| EES15103 | Sorghum | extracellular | 25.31 | 27.73 |
| KXG32174 | Sorghum | plastid | 36.1 | 27.53 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:8082016 | UniProt:C5WVT5 | InterPro:Cupin_1 | EnsemblPlants:EER95401 |
| ProteinID:EER95401 | ProteinID:EER95401.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 | GO:GO:0046872 |
| InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
| PANTHER:PTHR31238 | PANTHER:PTHR31238:SF5 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | EnsemblPlantsGene:SORBI_3001G483700 |
| SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI0001A82EED | RefSeq:XP_002468403.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:75497636..75498417
Molecular Weight (calculated)
25161.1 Da
IEP (calculated)
6.503
GRAVY (calculated)
0.234
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMRDAGDGG SIGISHRILL SLFLFAAVCM SDPDLLLDYC VADTATPPSS QFHLNGLACI DPASARAEHF ATSALSSPAT TEHRSATATA ALFGFNVTVT
101: SPASSLPGAN AQGLAMARTD LAPGGLAPPH THPRASEVAL VLAGSVLVGF ADTSYRLYTQ LLRAGEAFVF PRGMVHFLYN MDVAAPAVVL SGLNSQSPGA
201: QLVPFSSFRT EPPVPDEVLK IAFKINGQDV HRIQRNLGGS S
101: SPASSLPGAN AQGLAMARTD LAPGGLAPPH THPRASEVAL VLAGSVLVGF ADTSYRLYTQ LLRAGEAFVF PRGMVHFLYN MDVAAPAVVL SGLNSQSPGA
201: QLVPFSSFRT EPPVPDEVLK IAFKINGQDV HRIQRNLGGS S
001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
Arabidopsis Description
GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.