Factsheet for TraesCS4D01G293000.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G294100.1	Wheat	extracellular	90.0	92.83
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	84.78	92.42
HORVU4Hr1G076480.3	Barley	vacuole	83.48	81.7
Os03t0179100-00	Rice	extracellular, vacuole	75.22	76.89
Zm00001d027890_P001	Maize	extracellular, vacuole	70.87	70.87
EER95401	Sorghum	vacuole	71.3	68.05
VIT_01s0026g00970.t01	Wine grape	extracellular	54.78	57.01
GSMUA_Achr1P21920_001	Banana	endoplasmic reticulum, extracellular	57.39	55.46
PGSC0003DMT400058298	Potato	extracellular, vacuole	46.96	51.18
Solyc05g006500.2.1	Tomato	extracellular	48.26	50.45
KRH74710	Soybean	extracellular	45.65	47.73
KRH69437	Soybean	extracellular	44.78	46.82
AT1G10460.1	Thale cress	extracellular, vacuole	42.61	45.16
Bra031713.1-P	Field mustard	vacuole	32.61	39.47
CDY34891	Canola	vacuole	32.61	39.47
TraesCS3D01G254200.1	Wheat	extracellular	36.09	37.39
TraesCS6D01G366900.1	Wheat	vacuole	34.35	37.26
CDY07800	Canola	vacuole	30.87	37.17
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	33.91	36.79
TraesCS1D01G081700.1	Wheat	extracellular	35.65	36.61
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	33.91	36.11
TraesCS3D01G176100.1	Wheat	extracellular	34.35	35.91
TraesCS2D01G109300.1	Wheat	vacuole	34.78	35.87
TraesCS6D01G367800.1	Wheat	extracellular	33.48	35.65
TraesCS3D01G489800.1	Wheat	extracellular	34.78	35.56
TraesCS3D01G489700.1	Wheat	extracellular	34.78	35.56
TraesCS6D01G367700.1	Wheat	extracellular	33.04	35.19
TraesCS3D01G490500.1	Wheat	extracellular	33.48	34.22
TraesCS7D01G477200.1	Wheat	extracellular	33.48	34.22
TraesCS4D01G032500.1	Wheat	extracellular, unclear	33.48	33.92
TraesCS4D01G031700.1	Wheat	extracellular	32.61	33.63
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	32.61	33.48
TraesCS4D01G032200.1	Wheat	extracellular	32.61	33.48
TraesCS4D01G032000.1	Wheat	extracellular	32.61	33.48
TraesCS4D01G031900.1	Wheat	extracellular	32.61	33.48
TraesCS4D01G030700.1	Wheat	extracellular	32.61	33.48
TraesCS5D01G464000.1	Wheat	extracellular	33.48	33.48
TraesCS3D01G490400.1	Wheat	extracellular	31.3	33.33
TraesCS4D01G031800.1	Wheat	extracellular	32.17	33.04
TraesCS4D01G030800.1	Wheat	extracellular	32.17	33.04
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	30.43	33.02
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	26.09	32.79
TraesCS6D01G033100.1	Wheat	golgi	32.17	32.46
TraesCS3D01G490100.1	Wheat	extracellular	32.17	32.31
TraesCS4D01G030600.1	Wheat	extracellular	31.3	32.14
TraesCS2D01G073600.1	Wheat	extracellular	28.7	31.73
TraesCS3D01G490200.1	Wheat	extracellular	31.3	31.58
TraesCS3D01G490600.1	Wheat	extracellular	31.3	31.58
TraesCS2D01G566700.1	Wheat	extracellular	29.13	31.46
TraesCS2D01G073700.1	Wheat	extracellular	28.7	31.13
TraesCS3D01G490300.1	Wheat	extracellular	22.61	28.73

Protein Annotations

EnsemblPlants:TraesCS4D01G293000.1	EnsemblPlantsGene:TraesCS4D01G293000	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF5	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SMART:SM00835	SUPFAM:SSF51182	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr4D:+:463919194..463919886

Molecular Weight (calculated)

24062.8 Da

IEP (calculated)

6.504

GRAVY (calculated)

0.243

Length

230 amino acids

Sequence
(BLAST)

001: MITTADHAAP IAGAILSLVI IIFFSTACNS DPDLLLDFCI ADTTAAAAFH FNGLPCIDPA TARADHFATS ALSRPTDSSG TLFGFNATMT SPAASLPGAN
101: AQGLAMARVD LAPGGMAPLH SHPRASEVAL VLSGGVLVGF ADTSYRLYTQ RLRAGEAFVF PRGMVHFMRN EDTSAPAVVL SGLNSQSPGA QLVPFSAFLT
201: EPRLPDEVVK KTFRITGQDV QRIQRSLGGS

Best Arabidopsis Sequence Match ( AT1G10460.1 )
(BLAST)

001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG

Arabidopsis Description

GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.