Factsheet for TraesCS3D01G490100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G490600.1	Wheat	extracellular	93.45	93.86
TraesCS3D01G490300.1	Wheat	extracellular	73.36	92.82
TraesCS3B01G544000.1	Wheat	extracellular	92.14	92.14
TraesCS3D01G490200.1	Wheat	extracellular	91.27	91.67
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	88.65	81.85
Os01t0952100-00	Rice	extracellular	74.67	72.77
Zm00001d038137_P001	Maize	extracellular	72.05	72.69
TraesCS3D01G489700.1	Wheat	extracellular	69.43	70.67
TraesCS3D01G490500.1	Wheat	extracellular	69.0	70.22
TraesCS3D01G489800.1	Wheat	extracellular	68.56	69.78
EES02061	Sorghum	extracellular	71.18	68.49
TraesCS7D01G477200.1	Wheat	extracellular	66.81	68.0
TraesCS3D01G490400.1	Wheat	extracellular	58.52	62.04
TraesCS6D01G367800.1	Wheat	extracellular	53.71	56.94
TraesCS6D01G367700.1	Wheat	extracellular	52.84	56.02
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	52.84	56.02
TraesCS3D01G176100.1	Wheat	extracellular	52.84	55.0
TraesCS6D01G366900.1	Wheat	vacuole	50.22	54.25
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	50.22	54.25
TraesCS1D01G081700.1	Wheat	extracellular	49.34	50.45
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	38.43	48.09
TraesCS4D01G032200.1	Wheat	extracellular	45.41	46.43
TraesCS4D01G030700.1	Wheat	extracellular	44.98	45.98
TraesCS4D01G031700.1	Wheat	extracellular	44.54	45.74
TraesCS4D01G031800.1	Wheat	extracellular	44.54	45.54
TraesCS4D01G032000.1	Wheat	extracellular	44.54	45.54
TraesCS4D01G031900.1	Wheat	extracellular	44.54	45.54
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	44.54	45.54
TraesCS4D01G030800.1	Wheat	extracellular	44.1	45.09
TraesCS4D01G030600.1	Wheat	extracellular	43.23	44.2
TraesCS4D01G032500.1	Wheat	extracellular, unclear	43.67	44.05
TraesCS5D01G464000.1	Wheat	extracellular	41.48	41.3
TraesCS2D01G109300.1	Wheat	vacuole	38.86	39.91
TraesCS2D01G566700.1	Wheat	extracellular	37.12	39.91
TraesCS3D01G254200.1	Wheat	extracellular	38.43	39.64
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	36.68	39.62
TraesCS2D01G073600.1	Wheat	extracellular	35.37	38.94
TraesCS2D01G073700.1	Wheat	extracellular	35.81	38.68
TraesCS6D01G033100.1	Wheat	golgi	35.37	35.53
TraesCS4D01G293000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	32.31	32.17

Protein Annotations

EnsemblPlants:TraesCS3D01G490100.1	EnsemblPlantsGene:TraesCS3D01G490100	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:IPR014710	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
PANTHER:PTHR31238	PANTHER:PTHR31238:SF23	PFAM:PF00190	PRINTS:PR00325	SEG:seg	SignalP:SignalP-noTM
SMART:SM00835	SUPFAM:SSF51182	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3D:-:584343235..584344372

Molecular Weight (calculated)

23770.6 Da

IEP (calculated)

5.567

GRAVY (calculated)

0.201

Length

229 amino acids

Sequence
(BLAST)

001: MAKLCVVLLA ACAALLALAA APSTLAGDPD MLQDLCVADY ISLQGPLRVN GYPCKPAENV TADDFFYGGL ASAADVYGGG NPMGSVVTVA DVERLPGLNT
101: LGVSMSRVDY APWGGTNPPH SHQHATEILF VAEGTLQVGF VTTSGRHITR AVPKGGLFVF PRGMMHYERS VGEAPAVAIS AFDSQLPGTQ RLGEAMFGAA
201: PGVPTDVLAR ALQTDGGVVE SIRAKFQPK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.