Factsheet for TraesCS5D01G464000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G453200.1	Wheat	extracellular	97.83	97.83
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	96.52	96.52
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	93.48	73.88
Os03t0804500-01	Rice	extracellular	71.74	70.82
Zm00001d034514_P001	Maize	extracellular	69.13	69.74
EER93258	Sorghum	endoplasmic reticulum, extracellular	70.0	69.1
PGSC0003DMT400063164	Potato	vacuole	50.43	52.73
PGSC0003DMT400063166	Potato	vacuole	49.13	52.07
Solyc03g113570.1.1	Tomato	vacuole	49.57	51.82
Solyc03g113580.1.1	Tomato	vacuole	48.26	51.15
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	49.57	50.0
CDY19265	Canola	extracellular	46.09	49.53
CDY26706	Canola	extracellular	45.65	49.07
AT1G18970.1	Thale cress	extracellular, vacuole	46.52	48.64
CDY21688	Canola	extracellular	45.22	48.6
CDX81907	Canola	extracellular	45.22	48.6
Bra031058.1-P	Field mustard	extracellular	45.22	48.6
Bra025704.1-P	Field mustard	extracellular	45.22	48.6
AT1G18980.1	Thale cress	extracellular	46.09	48.18
TraesCS4D01G031900.1	Wheat	extracellular	46.09	47.32
TraesCS4D01G031700.1	Wheat	extracellular	45.65	47.09
TraesCS4D01G032000.1	Wheat	extracellular	45.65	46.88
TraesCS4D01G032200.1	Wheat	extracellular	45.65	46.88
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	36.96	46.45
TraesCS4D01G031800.1	Wheat	extracellular	45.22	46.43
TraesCS4D01G030700.1	Wheat	extracellular	45.22	46.43
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	45.22	46.43
TraesCS6D01G367700.1	Wheat	extracellular	43.48	46.3
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	43.48	46.3
TraesCS4D01G030800.1	Wheat	extracellular	44.78	45.98
TraesCS3D01G489700.1	Wheat	extracellular	44.35	45.33
TraesCS4D01G030600.1	Wheat	extracellular	43.91	45.09
TraesCS6D01G367800.1	Wheat	extracellular	42.17	44.91
TraesCS2D01G109300.1	Wheat	vacuole	43.48	44.84
TraesCS7D01G477200.1	Wheat	extracellular	43.48	44.44
TraesCS3D01G489800.1	Wheat	extracellular	43.48	44.44
TraesCS4D01G032500.1	Wheat	extracellular, unclear	43.48	44.05
TraesCS3D01G490500.1	Wheat	extracellular	43.04	44.0
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	40.43	43.87
TraesCS3D01G254200.1	Wheat	extracellular	42.17	43.69
TraesCS6D01G366900.1	Wheat	vacuole	40.0	43.4
TraesCS3D01G176100.1	Wheat	extracellular	41.3	43.18
CDX68163	Canola	extracellular	40.87	42.92
TraesCS3D01G490200.1	Wheat	extracellular	42.17	42.54
Bra003784.1-P	Field mustard	extracellular	40.43	42.47
TraesCS3D01G490600.1	Wheat	extracellular	41.74	42.11
TraesCS3D01G490100.1	Wheat	extracellular	41.3	41.48
TraesCS1D01G081700.1	Wheat	extracellular	40.0	41.07
TraesCS3D01G490300.1	Wheat	extracellular	32.17	40.88
AT1G74820.1	Thale cress	extracellular	39.57	40.09
TraesCS6D01G033100.1	Wheat	golgi	39.57	39.91
CDX85858	Canola	extracellular	39.57	39.74
TraesCS3D01G490400.1	Wheat	extracellular	36.09	38.43
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	34.78	37.74
TraesCS2D01G073700.1	Wheat	extracellular	34.78	37.74
TraesCS2D01G073600.1	Wheat	extracellular	33.91	37.5
TraesCS2D01G566700.1	Wheat	extracellular	34.35	37.09
TraesCS4D01G293000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.48	33.48

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PFscan:PS51257	PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G464000	EnsemblPlants:TraesCS5D01G464000.1	SEG:seg

Description

No Description!

Coordinates

chr5D:+:507435021..507435713

Molecular Weight (calculated)

23758.5 Da

IEP (calculated)

6.670

GRAVY (calculated)

0.350

Length

230 amino acids

Sequence
(BLAST)

001: MARSRVSIMP SPVLVLTVAV AALVSACTAD PEPVQDFCVA AVTNGSADHP SYPGFPCKPA SAVVSDDFFF AGLARSGAAD AAESPFGSSV TSGNVAAFPG
101: LNTLGVSINR VDLAPGGVNP LHSHPRAAEL VHVVAGQMLV GFVSTAGTFY SKVVREGESF VIPRGMVHFQ FNTGKEAARA VTVFNSQLPG VVLAAPSLFG
201: ADPEIPDAVL SKSFQVDGEI IKLLKSKFRT

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.