Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G543700.1 | Wheat | extracellular | 97.33 | 97.33 |
| TraesCS3B01G543600.1 | Wheat | extracellular | 96.0 | 96.43 |
| TraesCS3D01G490500.1 | Wheat | extracellular | 95.56 | 95.56 |
| HORVU3Hr1G107930.1 | Barley | extracellular | 95.11 | 95.11 |
| TraesCS3D01G489800.1 | Wheat | extracellular | 94.67 | 94.67 |
| TraesCS7D01G477200.1 | Wheat | extracellular | 90.67 | 90.67 |
| EES02060 | Sorghum | extracellular | 78.67 | 79.02 |
| Zm00001d011853_P001 | Maize | extracellular | 75.11 | 74.78 |
| EES04228 | Sorghum | extracellular | 74.67 | 74.67 |
| TraesCS3D01G490400.1 | Wheat | extracellular | 71.11 | 74.07 |
| Zm00001d042082_P001 | Maize | extracellular | 68.44 | 74.04 |
| TraesCS3D01G490300.1 | Wheat | extracellular | 57.78 | 71.82 |
| TraesCS3D01G490600.1 | Wheat | extracellular | 72.0 | 71.05 |
| TraesCS3D01G490200.1 | Wheat | extracellular | 70.67 | 69.74 |
| TraesCS3D01G490100.1 | Wheat | extracellular | 70.67 | 69.43 |
| TraesCS3D01G176100.1 | Wheat | extracellular | 64.44 | 65.91 |
| TraesCS6D01G367000.1 | Wheat | extracellular, plasma membrane, vacuole | 61.33 | 63.89 |
| TraesCS6D01G366700.1 | Wheat | extracellular, plasma membrane, vacuole | 59.11 | 62.74 |
| TraesCS6D01G367700.1 | Wheat | extracellular | 60.0 | 62.5 |
| TraesCS6D01G366900.1 | Wheat | vacuole | 58.67 | 62.26 |
| TraesCS6D01G367800.1 | Wheat | extracellular | 59.56 | 62.04 |
| TraesCS1D01G081700.1 | Wheat | extracellular | 57.78 | 58.04 |
| TraesCS4D01G031700.1 | Wheat | extracellular | 49.33 | 49.78 |
| TraesCS4D01G032100.1 | Wheat | extracellular, vacuole | 40.44 | 49.73 |
| TraesCS4D01G032200.1 | Wheat | extracellular | 49.33 | 49.55 |
| TraesCS4D01G030700.1 | Wheat | extracellular | 48.89 | 49.11 |
| TraesCS4D01G031900.1 | Wheat | extracellular | 48.44 | 48.66 |
| TraesCS4D01G032000.1 | Wheat | extracellular | 48.44 | 48.66 |
| TraesCS4D01G031600.1 | Wheat | extracellular, vacuole | 48.44 | 48.66 |
| TraesCS4D01G031800.1 | Wheat | extracellular | 48.0 | 48.21 |
| TraesCS4D01G030800.1 | Wheat | extracellular | 48.0 | 48.21 |
| TraesCS4D01G032500.1 | Wheat | extracellular, unclear | 47.56 | 47.14 |
| TraesCS4D01G030600.1 | Wheat | extracellular | 46.67 | 46.88 |
| TraesCS5D01G464000.1 | Wheat | extracellular | 45.33 | 44.35 |
| TraesCS3D01G254200.1 | Wheat | extracellular | 43.56 | 44.14 |
| TraesCS2D01G109300.1 | Wheat | vacuole | 43.56 | 43.95 |
| TraesCS7D01G180200.1 | Wheat | extracellular, vacuole | 38.22 | 40.57 |
| TraesCS2D01G073700.1 | Wheat | extracellular | 37.78 | 40.09 |
| TraesCS6D01G033100.1 | Wheat | golgi | 40.0 | 39.47 |
| TraesCS2D01G073600.1 | Wheat | extracellular | 36.44 | 39.42 |
| TraesCS2D01G566700.1 | Wheat | extracellular | 36.44 | 38.5 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 35.56 | 34.78 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF28 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 |
| SUPFAM:SSF51182 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G489700 | EnsemblPlants:TraesCS3D01G489700.1 | SEG:seg |
Description
No Description!
Coordinates
chr3D:+:584048747..584049857
Molecular Weight (calculated)
23471.5 Da
IEP (calculated)
7.384
GRAVY (calculated)
0.196
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKQLPAVL LAACATVLAL AAPLLAGDPD MLQDFCVADY KSLDGPLRLN GFPCKRPENV TADDFFSSAL ALPGNTGNPV GSAVTAANVE KLPGLNTLGV
101: SMSRVDYAPW GVNPPHTHPR ATEIIYVLEG SLDVGFVTTA GKLFARTVCK GELFVFPRGL VHYQKNNGGA PAMAISAFNS QLPGTQSLAV AMFGASPPVP
201: TDVLARALQI DGGLVETIKS KFPPK
101: SMSRVDYAPW GVNPPHTHPR ATEIIYVLEG SLDVGFVTTA GKLFARTVCK GELFVFPRGL VHYQKNNGGA PAMAISAFNS QLPGTQSLAV AMFGASPPVP
201: TDVLARALQI DGGLVETIKS KFPPK
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.