Factsheet for TraesCS6D01G367000.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	85.65	98.4
TraesCS6A01G382200.1	Wheat	extracellular	97.69	97.69
HORVU6Hr1G089510.1	Barley	extracellular	96.76	96.76
TraesCS6B01G420700.1	Wheat	extracellular	94.44	94.44
TraesCSU01G088800.1	Wheat	cytosol	52.78	93.44
TraesCS6D01G367700.1	Wheat	extracellular	90.28	90.28
TraesCS6D01G366900.1	Wheat	vacuole	87.5	89.15
Os01t0284500-01	Rice	extracellular	88.89	88.89
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	87.04	88.68
TraesCS6D01G367800.1	Wheat	extracellular	85.65	85.65
Zm00001d040519_P001	Maize	extracellular	78.7	77.98
Zm00001d008210_P002	Maize	extracellular	76.85	77.57
EES02802	Sorghum	extracellular	78.24	77.17
TraesCS3D01G176100.1	Wheat	extracellular	67.13	65.91
TraesCS1D01G081700.1	Wheat	extracellular	66.67	64.29
TraesCS3D01G490500.1	Wheat	extracellular	65.28	62.67
TraesCS3D01G489800.1	Wheat	extracellular	64.81	62.22
TraesCS3D01G489700.1	Wheat	extracellular	63.89	61.33
TraesCS7D01G477200.1	Wheat	extracellular	63.43	60.89
TraesCS3D01G490400.1	Wheat	extracellular	56.02	56.02
TraesCS3D01G490600.1	Wheat	extracellular	58.8	55.7
TraesCS3D01G490200.1	Wheat	extracellular	57.87	54.82
TraesCS3D01G490300.1	Wheat	extracellular	44.91	53.59
TraesCS3D01G490100.1	Wheat	extracellular	56.02	52.84
TraesCS4D01G031700.1	Wheat	extracellular	49.54	47.98
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	40.28	47.54
TraesCS4D01G032000.1	Wheat	extracellular	49.07	47.32
TraesCS4D01G032200.1	Wheat	extracellular	49.07	47.32
TraesCS4D01G031900.1	Wheat	extracellular	49.07	47.32
TraesCS4D01G030700.1	Wheat	extracellular	49.07	47.32
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	48.61	46.88
TraesCS4D01G030800.1	Wheat	extracellular	47.69	45.98
TraesCS4D01G031800.1	Wheat	extracellular	47.69	45.98
TraesCS4D01G030600.1	Wheat	extracellular	47.22	45.54
TraesCS3D01G254200.1	Wheat	extracellular	46.3	45.05
TraesCS2D01G109300.1	Wheat	vacuole	45.83	44.39
TraesCS4D01G032500.1	Wheat	extracellular, unclear	45.83	43.61
TraesCS5D01G464000.1	Wheat	extracellular	46.3	43.48
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	41.67	42.45
TraesCS2D01G073600.1	Wheat	extracellular	40.28	41.83
TraesCS2D01G073700.1	Wheat	extracellular	40.74	41.51
TraesCS2D01G566700.1	Wheat	extracellular	40.28	40.85
TraesCS6D01G033100.1	Wheat	golgi	40.28	38.16
TraesCS4D01G293000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.11	33.91

Protein Annotations

EnsemblPlants:TraesCS6D01G367000.1	EnsemblPlantsGene:TraesCS6D01G367000	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:454995770..454996521

Molecular Weight (calculated)

22494.1 Da

IEP (calculated)

8.087

GRAVY (calculated)

0.241

Length

216 amino acids

Sequence
(BLAST)

001: MARLQLSAVA ACAVLLALAA PSLAGDPDML QDVCVADLKS SIKLNGFPCK ADITADDFFF AGLKKAGNTN NPAGSNVTAA NVQSFPGVNT LGVSMARIDY
101: APGGQNPPHT HPRATEIIFV LEGVLEVGFI TTANKLFTKT ITVGDVFVFP RGLVHFQQNR GHGPASVIAG FNSQLQGTQA IATTLFAAAP PVPSDVLAKA
201: FRVGTEDIDA VKAKFK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.