Factsheet for TraesCS3D01G490400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G107870.1	Barley	extracellular	85.19	83.26
TraesCS3D01G489700.1	Wheat	extracellular	74.07	71.11
TraesCS3D01G490500.1	Wheat	extracellular	73.61	70.67
TraesCS3D01G489800.1	Wheat	extracellular	73.15	70.22
TraesCS7D01G477200.1	Wheat	extracellular	70.37	67.56
EES02060	Sorghum	extracellular	65.28	62.95
Zm00001d011853_P001	Maize	extracellular	63.89	61.06
Zm00001d042082_P001	Maize	extracellular	58.8	61.06
TraesCS3D01G490300.1	Wheat	extracellular	50.93	60.77
EES04228	Sorghum	extracellular	62.96	60.44
TraesCS3D01G490600.1	Wheat	extracellular	62.96	59.65
TraesCS3D01G490100.1	Wheat	extracellular	62.04	58.52
TraesCS3D01G490200.1	Wheat	extracellular	61.11	57.89
TraesCS3D01G176100.1	Wheat	extracellular	58.33	57.27
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	56.02	56.02
TraesCS6D01G367700.1	Wheat	extracellular	54.63	54.63
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	52.78	53.77
TraesCS6D01G367800.1	Wheat	extracellular	53.7	53.7
TraesCS6D01G366900.1	Wheat	vacuole	52.31	53.3
TraesCS1D01G081700.1	Wheat	extracellular	53.7	51.79
TraesCS4D01G032200.1	Wheat	extracellular	42.59	41.07
TraesCS4D01G031900.1	Wheat	extracellular	42.13	40.62
TraesCS4D01G032000.1	Wheat	extracellular	41.67	40.18
TraesCS4D01G030700.1	Wheat	extracellular	41.67	40.18
TraesCS4D01G031700.1	Wheat	extracellular	41.2	39.91
TraesCS4D01G031800.1	Wheat	extracellular	41.2	39.73
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	41.2	39.73
TraesCS2D01G109300.1	Wheat	vacuole	40.74	39.46
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	33.33	39.34
TraesCS4D01G030800.1	Wheat	extracellular	40.74	39.29
TraesCS4D01G032500.1	Wheat	extracellular, unclear	41.2	39.21
TraesCS4D01G030600.1	Wheat	extracellular	40.28	38.84
TraesCS3D01G254200.1	Wheat	extracellular	38.89	37.84
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	36.11	36.79
TraesCS2D01G073700.1	Wheat	extracellular	35.65	36.32
TraesCS5D01G464000.1	Wheat	extracellular	38.43	36.09
TraesCS2D01G073600.1	Wheat	extracellular	34.72	36.06
TraesCS2D01G566700.1	Wheat	extracellular	33.8	34.27
TraesCS6D01G033100.1	Wheat	golgi	33.8	32.02
TraesCS4D01G293000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	33.33	31.3

Protein Annotations

EnsemblPlants:TraesCS3D01G490400.1	EnsemblPlantsGene:TraesCS3D01G490400	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr3D:-:584447251..584448339

Molecular Weight (calculated)

22692.2 Da

IEP (calculated)

5.178

GRAVY (calculated)

0.113

Length

216 amino acids

Sequence
(BLAST)

001: MASKQLRAVL LAAYAAVLAL AGDPDMLQDL CVADYKSLDG PLRLNGYPCK RPESTTANDF FSDVLSVPGN TGGNPSGSVV TAATVDKVPG LNTMGVSMSR
101: IDYAPWGANP PHTHPGASEL LLVLEGSLDV GFITTTGKFV GRTVCKGEMF VFPRGLVHFQ RNNNGSPAAA ISAFNSQLPG TQKWAEALYT ALPPVPADVL
201: ARALDVNDCM VEPCVI

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.