Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G279300.1 | Wheat | extracellular | 98.65 | 98.65 |
| TraesCS4A01G181900.1 | Wheat | extracellular | 97.31 | 97.31 |
| TraesCS4D01G031600.1 | Wheat | extracellular, vacuole | 95.96 | 95.54 |
| TraesCS3B01G282400.1 | Wheat | extracellular, vacuole | 95.96 | 95.54 |
| TraesCS4D01G032200.1 | Wheat | extracellular | 95.52 | 95.09 |
| TraesCS4D01G032000.1 | Wheat | extracellular | 95.52 | 95.09 |
| TraesCS4D01G031800.1 | Wheat | extracellular | 94.62 | 94.2 |
| HORVU4Hr1G005380.1 | Barley | extracellular | 94.17 | 93.75 |
| TraesCS4D01G030700.1 | Wheat | extracellular | 94.17 | 93.75 |
| TraesCS4D01G031900.1 | Wheat | extracellular | 93.27 | 92.86 |
| TraesCS4D01G030800.1 | Wheat | extracellular | 92.83 | 92.41 |
| TraesCS4D01G032100.1 | Wheat | extracellular, vacuole | 75.78 | 92.35 |
| TraesCS4D01G030600.1 | Wheat | extracellular | 92.38 | 91.96 |
| TraesCS4D01G032500.1 | Wheat | extracellular, unclear | 83.41 | 81.94 |
| Os03t0694000-01 | Rice | extracellular | 78.48 | 76.42 |
| Os03t0693800-00 | Rice | extracellular | 78.03 | 75.98 |
| EER91050 | Sorghum | extracellular | 76.23 | 75.56 |
| Os03t0693700-01 | Rice | extracellular, plasma membrane, vacuole | 76.23 | 74.89 |
| Zm00001d033583_P001 | Maize | extracellular | 73.99 | 73.33 |
| Os03t0693900-00 | Rice | extracellular | 74.44 | 73.13 |
| GSMUA_Achr4P17250_001 | Banana | extracellular | 44.84 | 55.25 |
| GSMUA_AchrUn_... | Banana | extracellular | 37.22 | 51.88 |
| TraesCS6D01G367000.1 | Wheat | extracellular, plasma membrane, vacuole | 47.98 | 49.54 |
| TraesCS3D01G489700.1 | Wheat | extracellular | 49.78 | 49.33 |
| TraesCS3D01G489800.1 | Wheat | extracellular | 49.33 | 48.89 |
| TraesCS6D01G367800.1 | Wheat | extracellular | 47.09 | 48.61 |
| TraesCS6D01G367700.1 | Wheat | extracellular | 47.09 | 48.61 |
| TraesCS6D01G366900.1 | Wheat | vacuole | 46.19 | 48.58 |
| TraesCS6D01G366700.1 | Wheat | extracellular, plasma membrane, vacuole | 46.19 | 48.58 |
| TraesCS3D01G490500.1 | Wheat | extracellular | 48.88 | 48.44 |
| TraesCS7D01G477200.1 | Wheat | extracellular | 48.88 | 48.44 |
| TraesCS1D01G081700.1 | Wheat | extracellular | 47.98 | 47.77 |
| TraesCS3D01G176100.1 | Wheat | extracellular | 45.29 | 45.91 |
| TraesCS5D01G464000.1 | Wheat | extracellular | 47.09 | 45.65 |
| TraesCS3D01G490200.1 | Wheat | extracellular | 45.74 | 44.74 |
| TraesCS3D01G490600.1 | Wheat | extracellular | 45.74 | 44.74 |
| TraesCS3D01G490100.1 | Wheat | extracellular | 45.74 | 44.54 |
| TraesCS3D01G490300.1 | Wheat | extracellular | 35.87 | 44.2 |
| TraesCS2D01G109300.1 | Wheat | vacuole | 43.05 | 43.05 |
| TraesCS3D01G254200.1 | Wheat | extracellular | 41.7 | 41.89 |
| TraesCS3D01G490400.1 | Wheat | extracellular | 39.91 | 41.2 |
| TraesCS7D01G180200.1 | Wheat | extracellular, vacuole | 36.77 | 38.68 |
| TraesCS2D01G073700.1 | Wheat | extracellular | 36.32 | 38.21 |
| TraesCS2D01G073600.1 | Wheat | extracellular | 34.53 | 37.02 |
| TraesCS6D01G033100.1 | Wheat | golgi | 35.87 | 35.09 |
| TraesCS2D01G566700.1 | Wheat | extracellular | 31.84 | 33.33 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.63 | 32.61 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G031700.1 | EnsemblPlantsGene:TraesCS4D01G031700 | Gene3D:2.60.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Cupin_1 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll |
| InterPro:RmlC_Cupin_sf | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF26 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
| SignalP:SignalP-noTM | SMART:SM00835 | SUPFAM:SSF51182 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4D:-:14847166..14847837
Molecular Weight (calculated)
23370.4 Da
IEP (calculated)
6.100
GRAVY (calculated)
0.203
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MGCSKLIAGM FTMLLLAPAV LATDPDPLQD FCVADLDGMT VSVNGHPCKP MSEAGDDFLF SSKLAKAGNT STPNGSAVTE LDVAEWPGTN TLGVSMNRVD
101: FAPGGTNPPH IHPRATEIGI VMKGELLVGI LGSLDSGNKL YSRVVRAGET FLIPRGLMHF QFNVGKTEAS MVVSFNSQNP GIVFVPLTLF GSNPPIPTPV
201: LTKALRVEAG VVELLKSKFA GGS
101: FAPGGTNPPH IHPRATEIGI VMKGELLVGI LGSLDSGNKL YSRVVRAGET FLIPRGLMHF QFNVGKTEAS MVVSFNSQNP GIVFVPLTLF GSNPPIPTPV
201: LTKALRVEAG VVELLKSKFA GGS
001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
Arabidopsis Description
GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.