Factsheet for Zm00001d040519_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008210_P002	Maize	extracellular	88.53	90.19
EES02802	Sorghum	extracellular	88.53	88.13
Os01t0284500-01	Rice	extracellular	84.4	85.19
TraesCS6A01G382000.1	Wheat	cytosol	46.79	83.61
TraesCSU01G088800.1	Wheat	cytosol	45.41	81.15
HORVU6Hr1G089510.1	Barley	extracellular	80.28	81.02
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	68.81	79.79
TraesCS6A01G382200.1	Wheat	extracellular	77.98	78.7
TraesCS6B01G422100.1	Wheat	extracellular	77.98	78.7
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	77.98	78.7
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	77.06	77.78
TraesCS6B01G422000.1	Wheat	extracellular	77.06	77.78
TraesCS6D01G366900.1	Wheat	vacuole	75.23	77.36
TraesCS6B01G420700.1	Wheat	extracellular	76.61	77.31
TraesCS6D01G367700.1	Wheat	extracellular	76.61	77.31
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	74.77	76.89
TraesCS6A01G382900.1	Wheat	extracellular	76.15	76.85
TraesCS6A01G383000.1	Wheat	extracellular	76.15	76.85
TraesCS6B01G421200.1	Wheat	extracellular	75.69	76.39
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	76.61	75.57
HORVU6Hr1G089450.1	Barley	extracellular	74.77	75.46
TraesCS6B01G420800.1	Wheat	extracellular	74.77	75.46
TraesCS6D01G367800.1	Wheat	extracellular	74.31	75.0
Zm00001d038137_P001	Maize	extracellular	63.3	60.79
Zm00001d018954_P002	Maize	extracellular	62.39	58.87
Zm00001d011853_P001	Maize	extracellular	59.17	57.08
Zm00001d042082_P001	Maize	extracellular	54.13	56.73
Zm00001d033583_P001	Maize	extracellular	45.41	44.0
Zm00001d043710_P001	Maize	extracellular, vacuole	43.12	42.73
Zm00001d034514_P001	Maize	extracellular	42.66	40.79
Zm00001d032047_P001	Maize	cytosol	34.4	38.86
Zm00001d037513_P001	Maize	plastid	37.16	38.21
Zm00001d027890_P001	Maize	extracellular, vacuole	38.99	36.96
Zm00001d016697_P001	Maize	extracellular	38.53	35.9
Zm00001d032048_P001	Maize	cytosol	20.64	34.88

Protein Annotations

EntrezGene:100273935	Gene3D:2.60.120.10	MapMan:35.1	UniProt:B4FY73	EMBL:BT042061	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	ProteinID:ONM31483.1	ProteinID:ONM31484.1
ProteinID:ONM31485.1	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00017B7730	EnsemblPlantsGene:Zm00001d040519	EnsemblPlants:Zm00001d040519_P001	EnsemblPlants:Zm00001d040519_T001	SEG:seg	:

Description

Germin-like protein subfamily 2 member 1

Coordinates

chr3:-:47878960..47880337

Molecular Weight (calculated)

22822.3 Da

IEP (calculated)

7.126

GRAVY (calculated)

0.197

Length

218 amino acids

Sequence
(BLAST)

001: MAKVHLYVAA ACAVVLALAT PALAGDPDML QDVCPADYAS PVKLNGFACK ANFSADDFFF DGLRNPGNTN NPAGSVVTAA NVEKFPGVNT LGVSMARIDY
101: APGGQNPPHT HPRATEIIFV LEGTLEVGFI TTANALFTKT VTKGDVFVFP RGLVHFQQNR GHGPAAVVAA FNSQLQGTQA IAMTLFGAVP PVPSDILAKA
201: FRISSGEVDH IKANFAPK

Best Arabidopsis Sequence Match ( AT5G26700.1 )
(BLAST)

001: MASFATHLVV VVTMLFVAMA SAEMLQDVCV ADLSNAVKVN GYTCKDSTQI TPEDFYFKGL ANIAATNTST GSVVTGANVE KLPGLNTLGL SMSRIDYAPN
101: GLNPPHVHPR ASEIIFVLEG QLYVGFVTTA GKLIAKNLNK GDVFTFPKGL IHFQKNIANS PASVLAAFDS QLPGTQSLVA SLFGALPDDI LAKSFQLKHK
201: QVKKIKLRYA PKK

Arabidopsis Description

Probable germin-like protein subfamily 2 member 5 [Source:UniProtKB/Swiss-Prot;Acc:O65252]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.